Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P01788 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
P01788 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
P01788 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
P01788 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
P01788 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P01788 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.62□□□□□ -0.23
P01788 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.62□□□□□ -0.23
P01788 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P01788 Gm13401-201ENSMUST00000117074 291 ntBASIC13.62□□□□□ -0.23
P01788 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
P01788 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P01788 Mtag2-201ENSMUST00000058665 714 ntBASIC13.62□□□□□ -0.23
P01788 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P01788 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
P01788 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P01788 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P01788 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P01788 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P01788 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
P01788 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P01788 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.62□□□□□ -0.23
P01788 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P01788 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.62□□□□□ -0.23
P01788 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P01788 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
P01788 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P01788 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P01788 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P01788 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
P01788 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P01788 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P01788 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
P01788 Mir2861-201ENSMUST00000175539 82 ntBASIC13.61□□□□□ -0.23
P01788 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.61□□□□□ -0.23
P01788 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
P01788 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
P01788 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
P01788 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.61□□□□□ -0.23
P01788 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P01788 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P01788 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.61□□□□□ -0.23
P01788 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P01788 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P01788 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P01788 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P01788 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
P01788 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Gm10849-201ENSMUST00000100397 618 ntBASIC13.6□□□□□ -0.23
P01788 Gm7290-201ENSMUST00000104990 617 ntBASIC13.6□□□□□ -0.23
P01788 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.6□□□□□ -0.23
P01788 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
P01788 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Gm12918-201ENSMUST00000120234 636 ntBASIC13.6□□□□□ -0.23
P01788 Gm15710-201ENSMUST00000121821 636 ntBASIC13.6□□□□□ -0.23
P01788 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Gm5075-201ENSMUST00000196916 622 ntBASIC13.6□□□□□ -0.23
P01788 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.6□□□□□ -0.23
P01788 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.6□□□□□ -0.23
P01788 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.6□□□□□ -0.23
P01788 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Flg-201ENSMUST00000050758 1488 ntBASIC13.6□□□□□ -0.23
P01788 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P01788 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
P01788 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.59□□□□□ -0.23
P01788 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01788 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01788 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
P01788 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01788 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01788 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01788 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
P01788 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01788 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01788 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.59□□□□□ -0.23
P01788 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P01788 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01788 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01788 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01788 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01788 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
P01788 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
P01788 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
P01788 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms