Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vti1aO89116 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Vti1aO89116 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vti1aO89116 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vti1aO89116 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vti1aO89116 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vti1aO89116 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.55■□□□□ 0.56
Vti1aO89116 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vti1aO89116 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vti1aO89116 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vti1aO89116 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Vti1aO89116 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vti1aO89116 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Vti1aO89116 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vti1aO89116 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Vti1aO89116 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vti1aO89116 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.54■□□□□ 0.56
Vti1aO89116 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vti1aO89116 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vti1aO89116 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vti1aO89116 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vti1aO89116 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vti1aO89116 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vti1aO89116 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vti1aO89116 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vti1aO89116 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vti1aO89116 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vti1aO89116 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.53■□□□□ 0.56
Vti1aO89116 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Gm33142-201ENSMUST00000193913 867 ntBASIC18.53■□□□□ 0.56
Vti1aO89116 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.53■□□□□ 0.56
Vti1aO89116 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vti1aO89116 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Vti1aO89116 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vti1aO89116 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vti1aO89116 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vti1aO89116 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vti1aO89116 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Vti1aO89116 Gm14859-201ENSMUST00000117752 357 ntBASIC18.52■□□□□ 0.56
Vti1aO89116 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.52■□□□□ 0.56
Vti1aO89116 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vti1aO89116 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vti1aO89116 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.52■□□□□ 0.55
Vti1aO89116 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vti1aO89116 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Vti1aO89116 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vti1aO89116 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vti1aO89116 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vti1aO89116 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Vti1aO89116 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Vti1aO89116 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vti1aO89116 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vti1aO89116 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vti1aO89116 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.51■□□□□ 0.55
Vti1aO89116 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Vti1aO89116 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vti1aO89116 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vti1aO89116 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.51■□□□□ 0.55
Vti1aO89116 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vti1aO89116 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vti1aO89116 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vti1aO89116 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.51■□□□□ 0.55
Vti1aO89116 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vti1aO89116 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vti1aO89116 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vti1aO89116 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vti1aO89116 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vti1aO89116 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vti1aO89116 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.51■□□□□ 0.55
Vti1aO89116 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.51■□□□□ 0.55
Vti1aO89116 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.5■□□□□ 0.55
Vti1aO89116 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Vti1aO89116 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vti1aO89116 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vti1aO89116 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vti1aO89116 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Vti1aO89116 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vti1aO89116 Gm10418-201ENSMUST00000100943 576 ntBASIC18.5■□□□□ 0.55
Vti1aO89116 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vti1aO89116 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms