Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CopeO89079 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CopeO89079 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CopeO89079 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CopeO89079 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CopeO89079 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CopeO89079 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CopeO89079 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CopeO89079 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CopeO89079 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CopeO89079 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CopeO89079 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.79■□□□□ 0.44
CopeO89079 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CopeO89079 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
CopeO89079 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.78■□□□□ 0.44
CopeO89079 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CopeO89079 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CopeO89079 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.78■□□□□ 0.44
CopeO89079 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CopeO89079 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
CopeO89079 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CopeO89079 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CopeO89079 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CopeO89079 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CopeO89079 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CopeO89079 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CopeO89079 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CopeO89079 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CopeO89079 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CopeO89079 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CopeO89079 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CopeO89079 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CopeO89079 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.77■□□□□ 0.44
CopeO89079 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CopeO89079 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CopeO89079 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CopeO89079 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CopeO89079 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CopeO89079 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
CopeO89079 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CopeO89079 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CopeO89079 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CopeO89079 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CopeO89079 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CopeO89079 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CopeO89079 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CopeO89079 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CopeO89079 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CopeO89079 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CopeO89079 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CopeO89079 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CopeO89079 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.76■□□□□ 0.43
CopeO89079 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CopeO89079 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CopeO89079 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CopeO89079 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CopeO89079 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.76■□□□□ 0.43
CopeO89079 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CopeO89079 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CopeO89079 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
CopeO89079 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CopeO89079 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CopeO89079 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CopeO89079 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CopeO89079 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.75■□□□□ 0.43
CopeO89079 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.75■□□□□ 0.43
CopeO89079 Gm13216-201ENSMUST00000117145 591 ntBASIC17.75■□□□□ 0.43
CopeO89079 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CopeO89079 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CopeO89079 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CopeO89079 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CopeO89079 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CopeO89079 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CopeO89079 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CopeO89079 Gm11927-201ENSMUST00000118472 759 ntBASIC17.74■□□□□ 0.43
CopeO89079 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CopeO89079 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.74■□□□□ 0.43
CopeO89079 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms