Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abcd4O89016 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abcd4O89016 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Abcd4O89016 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Abcd4O89016 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.57■□□□□ 0.08
Abcd4O89016 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Abcd4O89016 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Abcd4O89016 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Abcd4O89016 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Abcd4O89016 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Abcd4O89016 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Abcd4O89016 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Abcd4O89016 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Abcd4O89016 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Abcd4O89016 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Abcd4O89016 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Abcd4O89016 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Abcd4O89016 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.57■□□□□ 0.08
Abcd4O89016 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Abcd4O89016 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Abcd4O89016 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Abcd4O89016 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abcd4O89016 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.56■□□□□ 0.08
Abcd4O89016 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.56■□□□□ 0.08
Abcd4O89016 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.56■□□□□ 0.08
Abcd4O89016 Gm12085-201ENSMUST00000119263 940 ntBASIC15.56■□□□□ 0.08
Abcd4O89016 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Abcd4O89016 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Abcd4O89016 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.56■□□□□ 0.08
Abcd4O89016 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Abcd4O89016 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.56■□□□□ 0.08
Abcd4O89016 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.56■□□□□ 0.08
Abcd4O89016 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Abcd4O89016 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.56■□□□□ 0.08
Abcd4O89016 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abcd4O89016 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abcd4O89016 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abcd4O89016 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abcd4O89016 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abcd4O89016 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.56■□□□□ 0.08
Abcd4O89016 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Abcd4O89016 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.56■□□□□ 0.08
Abcd4O89016 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Abcd4O89016 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abcd4O89016 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abcd4O89016 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Abcd4O89016 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abcd4O89016 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abcd4O89016 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.55■□□□□ 0.08
Abcd4O89016 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Abcd4O89016 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Abcd4O89016 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Abcd4O89016 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abcd4O89016 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abcd4O89016 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abcd4O89016 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abcd4O89016 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Abcd4O89016 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Abcd4O89016 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abcd4O89016 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abcd4O89016 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abcd4O89016 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abcd4O89016 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Abcd4O89016 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abcd4O89016 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abcd4O89016 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.54■□□□□ 0.08
Abcd4O89016 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.54■□□□□ 0.08
Abcd4O89016 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Abcd4O89016 Gm4974-201ENSMUST00000209974 875 ntBASIC15.54■□□□□ 0.08
Abcd4O89016 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abcd4O89016 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.54■□□□□ 0.08
Abcd4O89016 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abcd4O89016 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abcd4O89016 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abcd4O89016 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abcd4O89016 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abcd4O89016 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abcd4O89016 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abcd4O89016 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abcd4O89016 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abcd4O89016 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abcd4O89016 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abcd4O89016 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abcd4O89016 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abcd4O89016 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abcd4O89016 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abcd4O89016 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abcd4O89016 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Abcd4O89016 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abcd4O89016 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abcd4O89016 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abcd4O89016 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abcd4O89016 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Abcd4O89016 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abcd4O89016 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.53■□□□□ 0.08
Abcd4O89016 Gm18959-201ENSMUST00000208954 655 ntBASIC15.53■□□□□ 0.08
Abcd4O89016 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.53■□□□□ 0.08
Abcd4O89016 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.53■□□□□ 0.08
Abcd4O89016 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abcd4O89016 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms