Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.68■□□□□ 0.42
Syn1O88935 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syn1O88935 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syn1O88935 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syn1O88935 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syn1O88935 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syn1O88935 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syn1O88935 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syn1O88935 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syn1O88935 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.67■□□□□ 0.42
Syn1O88935 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Syn1O88935 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Syn1O88935 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.67■□□□□ 0.42
Syn1O88935 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.67■□□□□ 0.42
Syn1O88935 Gm6736-201ENSMUST00000166583 948 ntBASIC17.67■□□□□ 0.42
Syn1O88935 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Syn1O88935 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Syn1O88935 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syn1O88935 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syn1O88935 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Syn1O88935 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syn1O88935 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.67■□□□□ 0.42
Syn1O88935 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Syn1O88935 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syn1O88935 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Syn1O88935 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syn1O88935 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syn1O88935 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syn1O88935 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Syn1O88935 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syn1O88935 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syn1O88935 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Syn1O88935 Mir5131-201ENSMUST00000175426 93 ntBASIC17.66■□□□□ 0.42
Syn1O88935 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.66■□□□□ 0.42
Syn1O88935 Gm43575-201ENSMUST00000196420 516 ntBASIC17.66■□□□□ 0.42
Syn1O88935 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.66■□□□□ 0.42
Syn1O88935 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Syn1O88935 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Syn1O88935 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syn1O88935 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syn1O88935 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Syn1O88935 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syn1O88935 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.66■□□□□ 0.42
Syn1O88935 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syn1O88935 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syn1O88935 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syn1O88935 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syn1O88935 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syn1O88935 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syn1O88935 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syn1O88935 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syn1O88935 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syn1O88935 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syn1O88935 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Syn1O88935 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syn1O88935 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syn1O88935 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syn1O88935 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syn1O88935 Tgds-204ENSMUST00000228543 1594 ntBASIC17.65■□□□□ 0.42
Syn1O88935 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.65■□□□□ 0.42
Syn1O88935 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Syn1O88935 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syn1O88935 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.64■□□□□ 0.42
Syn1O88935 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Syn1O88935 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Syn1O88935 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syn1O88935 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.64■□□□□ 0.41
Syn1O88935 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.64■□□□□ 0.41
Syn1O88935 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syn1O88935 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Syn1O88935 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Syn1O88935 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.64■□□□□ 0.41
Syn1O88935 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syn1O88935 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syn1O88935 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Syn1O88935 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Syn1O88935 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Syn1O88935 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Syn1O88935 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syn1O88935 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syn1O88935 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syn1O88935 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syn1O88935 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syn1O88935 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syn1O88935 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Syn1O88935 Gm12644-201ENSMUST00000119935 606 ntBASIC17.63■□□□□ 0.41
Syn1O88935 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syn1O88935 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syn1O88935 Gm5364-201ENSMUST00000216789 889 ntBASIC17.63■□□□□ 0.41
Syn1O88935 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Syn1O88935 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syn1O88935 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syn1O88935 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Syn1O88935 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syn1O88935 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syn1O88935 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.63■□□□□ 0.41
Syn1O88935 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Syn1O88935 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syn1O88935 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.63■□□□□ 0.41
Syn1O88935 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms