Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac3O88895 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Hdac3O88895 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Hdac3O88895 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Hdac3O88895 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.39■□□□□ 0.05
Hdac3O88895 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac3O88895 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac3O88895 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac3O88895 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hdac3O88895 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac3O88895 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac3O88895 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac3O88895 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Hdac3O88895 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac3O88895 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac3O88895 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac3O88895 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac3O88895 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Hdac3O88895 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac3O88895 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Hdac3O88895 Gm13158-201ENSMUST00000122007 736 ntBASIC15.38■□□□□ 0.05
Hdac3O88895 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac3O88895 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac3O88895 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac3O88895 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Hdac3O88895 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac3O88895 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac3O88895 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac3O88895 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac3O88895 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac3O88895 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac3O88895 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac3O88895 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hdac3O88895 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.37■□□□□ 0.05
Hdac3O88895 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Hdac3O88895 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac3O88895 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac3O88895 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac3O88895 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac3O88895 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac3O88895 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.37■□□□□ 0.05
Hdac3O88895 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac3O88895 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Hdac3O88895 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac3O88895 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac3O88895 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac3O88895 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac3O88895 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Hdac3O88895 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac3O88895 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac3O88895 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac3O88895 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Hdac3O88895 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac3O88895 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hdac3O88895 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac3O88895 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac3O88895 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac3O88895 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac3O88895 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Hdac3O88895 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac3O88895 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.36■□□□□ 0.05
Hdac3O88895 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Hdac3O88895 Gm12527-201ENSMUST00000117967 564 ntBASIC15.36■□□□□ 0.05
Hdac3O88895 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.36■□□□□ 0.05
Hdac3O88895 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.36■□□□□ 0.05
Hdac3O88895 Gm18666-201ENSMUST00000190039 958 ntBASIC15.36■□□□□ 0.05
Hdac3O88895 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.36■□□□□ 0.05
Hdac3O88895 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.36■□□□□ 0.05
Hdac3O88895 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac3O88895 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Hdac3O88895 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac3O88895 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Hdac3O88895 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac3O88895 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac3O88895 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac3O88895 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac3O88895 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac3O88895 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac3O88895 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hdac3O88895 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac3O88895 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac3O88895 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac3O88895 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.35■□□□□ 0.05
Hdac3O88895 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Hdac3O88895 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac3O88895 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.35■□□□□ 0.05
Hdac3O88895 Gm11643-201ENSMUST00000119578 864 ntBASIC15.35■□□□□ 0.05
Hdac3O88895 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.35■□□□□ 0.05
Hdac3O88895 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac3O88895 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.35■□□□□ 0.05
Hdac3O88895 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac3O88895 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac3O88895 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac3O88895 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac3O88895 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac3O88895 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac3O88895 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hdac3O88895 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.35■□□□□ 0.05
Hdac3O88895 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hdac3O88895 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms