Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Best1O88870 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.54■□□□□ 0.24
Best1O88870 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Best1O88870 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Best1O88870 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Best1O88870 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Best1O88870 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Best1O88870 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Best1O88870 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Best1O88870 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Best1O88870 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.54■□□□□ 0.24
Best1O88870 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.54■□□□□ 0.24
Best1O88870 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.54■□□□□ 0.24
Best1O88870 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Best1O88870 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Best1O88870 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
Best1O88870 Gm10566-201ENSMUST00000086739 996 ntBASIC16.54■□□□□ 0.24
Best1O88870 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Best1O88870 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Best1O88870 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Best1O88870 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Best1O88870 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Best1O88870 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Best1O88870 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Best1O88870 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Best1O88870 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Best1O88870 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Best1O88870 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Best1O88870 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Best1O88870 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Best1O88870 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Best1O88870 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.53■□□□□ 0.24
Best1O88870 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Best1O88870 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Best1O88870 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Best1O88870 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Best1O88870 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Best1O88870 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Best1O88870 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Best1O88870 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.53■□□□□ 0.24
Best1O88870 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Best1O88870 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Best1O88870 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Best1O88870 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Best1O88870 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Best1O88870 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Best1O88870 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Best1O88870 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Best1O88870 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.52■□□□□ 0.24
Best1O88870 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.52■□□□□ 0.24
Best1O88870 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.52■□□□□ 0.24
Best1O88870 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Best1O88870 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Best1O88870 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Best1O88870 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Best1O88870 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Best1O88870 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Best1O88870 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.52■□□□□ 0.23
Best1O88870 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Best1O88870 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Best1O88870 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Best1O88870 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Best1O88870 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Best1O88870 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Best1O88870 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Best1O88870 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.51■□□□□ 0.23
Best1O88870 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Best1O88870 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Best1O88870 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Best1O88870 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Best1O88870 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.51■□□□□ 0.23
Best1O88870 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Best1O88870 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Best1O88870 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Best1O88870 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Best1O88870 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Best1O88870 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Best1O88870 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.51■□□□□ 0.23
Best1O88870 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Best1O88870 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.51■□□□□ 0.23
Best1O88870 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Best1O88870 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Best1O88870 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Best1O88870 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Best1O88870 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Best1O88870 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Best1O88870 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Best1O88870 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Best1O88870 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Best1O88870 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Best1O88870 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.5■□□□□ 0.23
Best1O88870 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Best1O88870 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.5■□□□□ 0.23
Best1O88870 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.5■□□□□ 0.23
Best1O88870 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Best1O88870 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Best1O88870 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Best1O88870 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.49■□□□□ 0.23
Best1O88870 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.49■□□□□ 0.23
Best1O88870 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms