Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ShdO88834 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ShdO88834 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ShdO88834 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ShdO88834 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ShdO88834 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.57■□□□□ 0.4
ShdO88834 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ShdO88834 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ShdO88834 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ShdO88834 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ShdO88834 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.57■□□□□ 0.4
ShdO88834 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.57■□□□□ 0.4
ShdO88834 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.57■□□□□ 0.4
ShdO88834 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.57■□□□□ 0.4
ShdO88834 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ShdO88834 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ShdO88834 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ShdO88834 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ShdO88834 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.56■□□□□ 0.4
ShdO88834 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
ShdO88834 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShdO88834 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShdO88834 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ShdO88834 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShdO88834 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ShdO88834 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShdO88834 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ShdO88834 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShdO88834 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShdO88834 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShdO88834 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.56■□□□□ 0.4
ShdO88834 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShdO88834 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShdO88834 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ShdO88834 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ShdO88834 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShdO88834 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.56■□□□□ 0.4
ShdO88834 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShdO88834 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShdO88834 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShdO88834 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShdO88834 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShdO88834 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShdO88834 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShdO88834 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShdO88834 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.55■□□□□ 0.4
ShdO88834 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.55■□□□□ 0.4
ShdO88834 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShdO88834 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShdO88834 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ShdO88834 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShdO88834 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
ShdO88834 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.55■□□□□ 0.4
ShdO88834 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShdO88834 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShdO88834 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShdO88834 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShdO88834 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShdO88834 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ShdO88834 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShdO88834 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.55■□□□□ 0.4
ShdO88834 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ShdO88834 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShdO88834 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ShdO88834 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShdO88834 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.54■□□□□ 0.4
ShdO88834 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShdO88834 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ShdO88834 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShdO88834 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.54■□□□□ 0.4
ShdO88834 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ShdO88834 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShdO88834 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.54■□□□□ 0.4
ShdO88834 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ShdO88834 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.54■□□□□ 0.4
ShdO88834 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShdO88834 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ShdO88834 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShdO88834 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShdO88834 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ShdO88834 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShdO88834 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShdO88834 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShdO88834 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShdO88834 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShdO88834 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShdO88834 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ShdO88834 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShdO88834 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShdO88834 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShdO88834 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ShdO88834 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShdO88834 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ShdO88834 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ShdO88834 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ShdO88834 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.53■□□□□ 0.4
ShdO88834 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShdO88834 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ShdO88834 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ShdO88834 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms