Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc4a4O88343 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.32■□□□□ 0.84
Slc4a4O88343 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slc4a4O88343 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.32■□□□□ 0.84
Slc4a4O88343 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Slc4a4O88343 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc4a4O88343 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc4a4O88343 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc4a4O88343 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc4a4O88343 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc4a4O88343 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slc4a4O88343 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc4a4O88343 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.3■□□□□ 0.84
Slc4a4O88343 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc4a4O88343 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc4a4O88343 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc4a4O88343 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc4a4O88343 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc4a4O88343 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc4a4O88343 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.3■□□□□ 0.84
Slc4a4O88343 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.3■□□□□ 0.84
Slc4a4O88343 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc4a4O88343 Gm13474-201ENSMUST00000122466 815 ntBASIC20.3■□□□□ 0.84
Slc4a4O88343 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc4a4O88343 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc4a4O88343 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Slc4a4O88343 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc4a4O88343 Gm18032-201ENSMUST00000222541 538 ntBASIC20.3■□□□□ 0.84
Slc4a4O88343 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Slc4a4O88343 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc4a4O88343 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc4a4O88343 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc4a4O88343 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.29■□□□□ 0.84
Slc4a4O88343 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Slc4a4O88343 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc4a4O88343 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc4a4O88343 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc4a4O88343 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc4a4O88343 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc4a4O88343 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
Slc4a4O88343 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.29■□□□□ 0.84
Slc4a4O88343 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc4a4O88343 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc4a4O88343 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc4a4O88343 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc4a4O88343 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.28■□□□□ 0.84
Slc4a4O88343 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Slc4a4O88343 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc4a4O88343 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc4a4O88343 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc4a4O88343 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc4a4O88343 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.28■□□□□ 0.84
Slc4a4O88343 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Slc4a4O88343 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc4a4O88343 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Slc4a4O88343 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc4a4O88343 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc4a4O88343 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.28■□□□□ 0.84
Slc4a4O88343 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc4a4O88343 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc4a4O88343 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc4a4O88343 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc4a4O88343 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc4a4O88343 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc4a4O88343 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Slc4a4O88343 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Slc4a4O88343 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc4a4O88343 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc4a4O88343 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc4a4O88343 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc4a4O88343 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc4a4O88343 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Slc4a4O88343 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc4a4O88343 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc4a4O88343 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Slc4a4O88343 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc4a4O88343 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc4a4O88343 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Slc4a4O88343 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Slc4a4O88343 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.26■□□□□ 0.83
Slc4a4O88343 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc4a4O88343 Gm22697-201ENSMUST00000175194 63 ntBASIC20.26■□□□□ 0.83
Slc4a4O88343 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.26■□□□□ 0.83
Slc4a4O88343 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc4a4O88343 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc4a4O88343 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc4a4O88343 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Slc4a4O88343 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc4a4O88343 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc4a4O88343 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.25■□□□□ 0.83
Slc4a4O88343 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Slc4a4O88343 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc4a4O88343 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc4a4O88343 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Slc4a4O88343 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.25■□□□□ 0.83
Slc4a4O88343 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc4a4O88343 Gm18958-201ENSMUST00000174258 762 ntBASIC20.25■□□□□ 0.83
Slc4a4O88343 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc4a4O88343 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Slc4a4O88343 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms