Protein–RNA interactions for Protein: O70491

Stra6, Receptor for retinol uptake STRA6, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6O70491 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Stra6O70491 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Stra6O70491 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Stra6O70491 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Stra6O70491 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Stra6O70491 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.02■□□□□ 0.63
Stra6O70491 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Stra6O70491 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Stra6O70491 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Stra6O70491 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stra6O70491 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Stra6O70491 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Stra6O70491 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stra6O70491 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stra6O70491 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Stra6O70491 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stra6O70491 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stra6O70491 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Stra6O70491 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Stra6O70491 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Stra6O70491 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19■□□□□ 0.63
Stra6O70491 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Stra6O70491 Gm6623-201ENSMUST00000173570 544 ntBASIC19■□□□□ 0.63
Stra6O70491 Gm28033-201ENSMUST00000184224 96 ntBASIC19■□□□□ 0.63
Stra6O70491 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Stra6O70491 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Stra6O70491 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Stra6O70491 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19■□□□□ 0.63
Stra6O70491 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19■□□□□ 0.63
Stra6O70491 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19■□□□□ 0.63
Stra6O70491 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Stra6O70491 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19■□□□□ 0.63
Stra6O70491 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19■□□□□ 0.63
Stra6O70491 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19■□□□□ 0.63
Stra6O70491 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Stra6O70491 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Stra6O70491 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stra6O70491 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stra6O70491 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stra6O70491 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stra6O70491 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Stra6O70491 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.99■□□□□ 0.63
Stra6O70491 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.99■□□□□ 0.63
Stra6O70491 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stra6O70491 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stra6O70491 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stra6O70491 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stra6O70491 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.99■□□□□ 0.63
Stra6O70491 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stra6O70491 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stra6O70491 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.99■□□□□ 0.63
Stra6O70491 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stra6O70491 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stra6O70491 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stra6O70491 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stra6O70491 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Stra6O70491 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stra6O70491 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stra6O70491 Gm27000-201ENSMUST00000182943 842 ntBASIC18.98■□□□□ 0.63
Stra6O70491 Gm17807-201ENSMUST00000186869 298 ntBASIC18.98■□□□□ 0.63
Stra6O70491 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.98■□□□□ 0.63
Stra6O70491 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Stra6O70491 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Stra6O70491 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Stra6O70491 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Stra6O70491 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stra6O70491 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stra6O70491 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Stra6O70491 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stra6O70491 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Stra6O70491 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.97■□□□□ 0.63
Stra6O70491 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.97■□□□□ 0.63
Stra6O70491 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.97■□□□□ 0.63
Stra6O70491 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.97■□□□□ 0.63
Stra6O70491 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stra6O70491 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stra6O70491 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Stra6O70491 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stra6O70491 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Stra6O70491 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Stra6O70491 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stra6O70491 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stra6O70491 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stra6O70491 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stra6O70491 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Stra6O70491 Gm17971-201ENSMUST00000190239 806 ntBASIC18.96■□□□□ 0.63
Stra6O70491 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Stra6O70491 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stra6O70491 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stra6O70491 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.96■□□□□ 0.63
Stra6O70491 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stra6O70491 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.96■□□□□ 0.63
Stra6O70491 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Stra6O70491 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stra6O70491 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.95■□□□□ 0.62
Stra6O70491 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Stra6O70491 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stra6O70491 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stra6O70491 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stra6O70491 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms