Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC22.37■■□□□ 1.17
Ubr1O70481 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC22.37■■□□□ 1.17
Ubr1O70481 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ubr1O70481 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ubr1O70481 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC22.36■■□□□ 1.17
Ubr1O70481 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ubr1O70481 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC22.36■■□□□ 1.17
Ubr1O70481 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC22.36■■□□□ 1.17
Ubr1O70481 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ubr1O70481 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ubr1O70481 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Ubr1O70481 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ubr1O70481 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ubr1O70481 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ubr1O70481 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ubr1O70481 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ubr1O70481 AL590614.2-201ENSMUST00000225374 1937 ntBASIC22.36■■□□□ 1.17
Ubr1O70481 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ubr1O70481 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ubr1O70481 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ubr1O70481 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ubr1O70481 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ubr1O70481 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Ubr1O70481 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ubr1O70481 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ubr1O70481 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ubr1O70481 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ubr1O70481 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC22.34■■□□□ 1.17
Ubr1O70481 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ubr1O70481 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC22.34■■□□□ 1.17
Ubr1O70481 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Ubr1O70481 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ubr1O70481 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ubr1O70481 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Ubr1O70481 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Ubr1O70481 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ubr1O70481 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC22.33■■□□□ 1.17
Ubr1O70481 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ubr1O70481 Gm12895-201ENSMUST00000122214 226 ntBASIC22.33■■□□□ 1.16
Ubr1O70481 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC22.33■■□□□ 1.16
Ubr1O70481 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ubr1O70481 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ubr1O70481 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ubr1O70481 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ubr1O70481 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ubr1O70481 Gm13884-201ENSMUST00000118103 829 ntBASIC22.32■■□□□ 1.16
Ubr1O70481 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
Ubr1O70481 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC22.32■■□□□ 1.16
Ubr1O70481 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ubr1O70481 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ubr1O70481 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ubr1O70481 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ubr1O70481 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ubr1O70481 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ubr1O70481 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Ubr1O70481 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ubr1O70481 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ubr1O70481 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Ubr1O70481 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ubr1O70481 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC22.3■■□□□ 1.16
Ubr1O70481 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ubr1O70481 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC22.3■■□□□ 1.16
Ubr1O70481 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC22.3■■□□□ 1.16
Ubr1O70481 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ubr1O70481 Gm5953-201ENSMUST00000220644 2616 ntBASIC22.3■■□□□ 1.16
Ubr1O70481 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ubr1O70481 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ubr1O70481 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ubr1O70481 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ubr1O70481 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ubr1O70481 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ubr1O70481 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC22.3■■□□□ 1.16
Ubr1O70481 Mir8098-201ENSMUST00000184011 137 ntBASIC22.3■■□□□ 1.16
Ubr1O70481 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Ubr1O70481 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC22.3■■□□□ 1.16
Ubr1O70481 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ubr1O70481 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC22.29■■□□□ 1.16
Ubr1O70481 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ubr1O70481 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ubr1O70481 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ubr1O70481 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ubr1O70481 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC22.29■■□□□ 1.16
Ubr1O70481 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC22.29■■□□□ 1.16
Ubr1O70481 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ubr1O70481 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ubr1O70481 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ubr1O70481 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ubr1O70481 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Ubr1O70481 Zfp264-201ENSMUST00000208656 1563 ntBASIC22.28■■□□□ 1.16
Ubr1O70481 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ubr1O70481 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Ubr1O70481 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ubr1O70481 AC159301.1-201ENSMUST00000225130 1182 ntBASIC22.28■■□□□ 1.16
Ubr1O70481 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ubr1O70481 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ubr1O70481 Gm29707-201ENSMUST00000196325 491 ntBASIC22.27■■□□□ 1.16
Ubr1O70481 AW822252-206ENSMUST00000208904 237 ntBASIC22.27■■□□□ 1.16
Ubr1O70481 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ubr1O70481 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Ubr1O70481 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms