Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pknox1O70477 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pknox1O70477 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.12■□□□□ 0.33
Pknox1O70477 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.11■□□□□ 0.33
Pknox1O70477 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pknox1O70477 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pknox1O70477 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pknox1O70477 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pknox1O70477 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.11■□□□□ 0.33
Pknox1O70477 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pknox1O70477 Gm6576-201ENSMUST00000169678 883 ntBASIC17.11■□□□□ 0.33
Pknox1O70477 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pknox1O70477 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pknox1O70477 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pknox1O70477 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pknox1O70477 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pknox1O70477 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pknox1O70477 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pknox1O70477 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pknox1O70477 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pknox1O70477 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pknox1O70477 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.11■□□□□ 0.33
Pknox1O70477 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pknox1O70477 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pknox1O70477 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pknox1O70477 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pknox1O70477 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pknox1O70477 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pknox1O70477 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pknox1O70477 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pknox1O70477 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pknox1O70477 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pknox1O70477 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pknox1O70477 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pknox1O70477 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pknox1O70477 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pknox1O70477 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pknox1O70477 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pknox1O70477 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pknox1O70477 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pknox1O70477 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pknox1O70477 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pknox1O70477 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pknox1O70477 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pknox1O70477 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.09■□□□□ 0.33
Pknox1O70477 Gm13158-201ENSMUST00000122007 736 ntBASIC17.09■□□□□ 0.33
Pknox1O70477 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.09■□□□□ 0.33
Pknox1O70477 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pknox1O70477 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pknox1O70477 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pknox1O70477 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pknox1O70477 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pknox1O70477 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Pknox1O70477 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pknox1O70477 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pknox1O70477 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pknox1O70477 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Pknox1O70477 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pknox1O70477 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Pknox1O70477 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pknox1O70477 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pknox1O70477 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pknox1O70477 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.08■□□□□ 0.33
Pknox1O70477 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pknox1O70477 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pknox1O70477 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pknox1O70477 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Pknox1O70477 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pknox1O70477 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
Pknox1O70477 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.08■□□□□ 0.32
Pknox1O70477 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.08■□□□□ 0.32
Pknox1O70477 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pknox1O70477 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.08■□□□□ 0.32
Pknox1O70477 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pknox1O70477 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Pknox1O70477 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pknox1O70477 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pknox1O70477 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pknox1O70477 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pknox1O70477 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pknox1O70477 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pknox1O70477 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pknox1O70477 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.07■□□□□ 0.32
Pknox1O70477 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pknox1O70477 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pknox1O70477 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Pknox1O70477 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pknox1O70477 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.07■□□□□ 0.32
Pknox1O70477 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.07■□□□□ 0.32
Pknox1O70477 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pknox1O70477 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pknox1O70477 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pknox1O70477 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pknox1O70477 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Pknox1O70477 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pknox1O70477 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pknox1O70477 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pknox1O70477 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pknox1O70477 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pknox1O70477 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms