Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim1O70400 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim1O70400 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pdlim1O70400 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim1O70400 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim1O70400 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim1O70400 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim1O70400 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim1O70400 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim1O70400 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Pdlim1O70400 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim1O70400 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.97■□□□□ 0.31
Pdlim1O70400 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim1O70400 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Pdlim1O70400 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pdlim1O70400 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim1O70400 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.97■□□□□ 0.31
Pdlim1O70400 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Pdlim1O70400 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pdlim1O70400 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim1O70400 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim1O70400 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim1O70400 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim1O70400 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim1O70400 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim1O70400 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pdlim1O70400 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim1O70400 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim1O70400 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim1O70400 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim1O70400 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim1O70400 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim1O70400 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Pdlim1O70400 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Pdlim1O70400 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim1O70400 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.96■□□□□ 0.31
Pdlim1O70400 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.96■□□□□ 0.31
Pdlim1O70400 Gm11539-201ENSMUST00000119837 557 ntBASIC16.96■□□□□ 0.31
Pdlim1O70400 Gm13436-201ENSMUST00000120418 567 ntBASIC16.96■□□□□ 0.31
Pdlim1O70400 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim1O70400 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.96■□□□□ 0.31
Pdlim1O70400 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Pdlim1O70400 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Pdlim1O70400 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim1O70400 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim1O70400 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim1O70400 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Pdlim1O70400 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pdlim1O70400 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.96■□□□□ 0.3
Pdlim1O70400 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.96■□□□□ 0.3
Pdlim1O70400 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Pdlim1O70400 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pdlim1O70400 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.96■□□□□ 0.3
Pdlim1O70400 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Pdlim1O70400 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim1O70400 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim1O70400 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim1O70400 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pdlim1O70400 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim1O70400 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.95■□□□□ 0.3
Pdlim1O70400 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim1O70400 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim1O70400 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim1O70400 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Pdlim1O70400 Gm13559-201ENSMUST00000120476 863 ntBASIC16.95■□□□□ 0.3
Pdlim1O70400 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.95■□□□□ 0.3
Pdlim1O70400 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.95■□□□□ 0.3
Pdlim1O70400 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.95■□□□□ 0.3
Pdlim1O70400 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim1O70400 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim1O70400 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim1O70400 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim1O70400 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim1O70400 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim1O70400 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pdlim1O70400 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pdlim1O70400 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim1O70400 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim1O70400 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Pdlim1O70400 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim1O70400 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.94■□□□□ 0.3
Pdlim1O70400 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pdlim1O70400 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim1O70400 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim1O70400 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim1O70400 Gm15565-201ENSMUST00000118890 427 ntBASIC16.94■□□□□ 0.3
Pdlim1O70400 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim1O70400 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim1O70400 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim1O70400 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim1O70400 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim1O70400 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pdlim1O70400 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim1O70400 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim1O70400 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim1O70400 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim1O70400 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim1O70400 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pdlim1O70400 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pdlim1O70400 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms