Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim3O70209 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim3O70209 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim3O70209 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim3O70209 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim3O70209 Gm13401-201ENSMUST00000117074 291 ntBASIC15.62■□□□□ 0.09
Pdlim3O70209 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pdlim3O70209 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim3O70209 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim3O70209 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
Pdlim3O70209 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim3O70209 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim3O70209 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim3O70209 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim3O70209 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim3O70209 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim3O70209 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.61■□□□□ 0.09
Pdlim3O70209 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim3O70209 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim3O70209 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim3O70209 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim3O70209 Gm7290-201ENSMUST00000104990 617 ntBASIC15.61■□□□□ 0.09
Pdlim3O70209 Gm12918-201ENSMUST00000120234 636 ntBASIC15.61■□□□□ 0.09
Pdlim3O70209 Gm15710-201ENSMUST00000121821 636 ntBASIC15.61■□□□□ 0.09
Pdlim3O70209 Gm5075-201ENSMUST00000196916 622 ntBASIC15.61■□□□□ 0.09
Pdlim3O70209 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim3O70209 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.61■□□□□ 0.09
Pdlim3O70209 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.61■□□□□ 0.09
Pdlim3O70209 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim3O70209 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Pdlim3O70209 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim3O70209 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim3O70209 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim3O70209 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim3O70209 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.61■□□□□ 0.09
Pdlim3O70209 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim3O70209 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.6■□□□□ 0.09
Pdlim3O70209 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim3O70209 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pdlim3O70209 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim3O70209 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim3O70209 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.6■□□□□ 0.09
Pdlim3O70209 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim3O70209 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim3O70209 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.6■□□□□ 0.09
Pdlim3O70209 Gm6211-202ENSMUST00000167849 925 ntBASIC15.6■□□□□ 0.09
Pdlim3O70209 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.6■□□□□ 0.09
Pdlim3O70209 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.6■□□□□ 0.09
Pdlim3O70209 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim3O70209 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim3O70209 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim3O70209 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim3O70209 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim3O70209 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pdlim3O70209 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim3O70209 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim3O70209 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim3O70209 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pdlim3O70209 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim3O70209 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.59■□□□□ 0.09
Pdlim3O70209 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim3O70209 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.59■□□□□ 0.09
Pdlim3O70209 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim3O70209 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pdlim3O70209 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim3O70209 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Pdlim3O70209 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pdlim3O70209 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Pdlim3O70209 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim3O70209 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim3O70209 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim3O70209 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim3O70209 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim3O70209 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pdlim3O70209 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim3O70209 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim3O70209 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim3O70209 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.59■□□□□ 0.09
Pdlim3O70209 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim3O70209 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim3O70209 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim3O70209 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pdlim3O70209 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pdlim3O70209 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim3O70209 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim3O70209 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim3O70209 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim3O70209 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim3O70209 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Pdlim3O70209 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim3O70209 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim3O70209 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim3O70209 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.58■□□□□ 0.08
Pdlim3O70209 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.58■□□□□ 0.08
Pdlim3O70209 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim3O70209 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pdlim3O70209 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim3O70209 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.58■□□□□ 0.08
Pdlim3O70209 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim3O70209 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms