Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarce1O54941 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarce1O54941 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Smarce1O54941 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smarce1O54941 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.48■□□□□ 0.87
Smarce1O54941 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.48■□□□□ 0.87
Smarce1O54941 Dio3-201ENSMUST00000097228 1449 ntBASIC20.48■□□□□ 0.87
Smarce1O54941 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.48■□□□□ 0.87
Smarce1O54941 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarce1O54941 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarce1O54941 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarce1O54941 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Smarce1O54941 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC20.48■□□□□ 0.87
Smarce1O54941 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarce1O54941 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarce1O54941 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.47■□□□□ 0.87
Smarce1O54941 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smarce1O54941 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarce1O54941 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarce1O54941 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarce1O54941 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smarce1O54941 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.47■□□□□ 0.87
Smarce1O54941 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smarce1O54941 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarce1O54941 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarce1O54941 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarce1O54941 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smarce1O54941 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Smarce1O54941 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.47■□□□□ 0.87
Smarce1O54941 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Smarce1O54941 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarce1O54941 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarce1O54941 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarce1O54941 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.47■□□□□ 0.87
Smarce1O54941 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smarce1O54941 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarce1O54941 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarce1O54941 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarce1O54941 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.46■□□□□ 0.87
Smarce1O54941 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarce1O54941 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarce1O54941 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smarce1O54941 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Smarce1O54941 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarce1O54941 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.46■□□□□ 0.87
Smarce1O54941 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Smarce1O54941 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Smarce1O54941 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smarce1O54941 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smarce1O54941 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.46■□□□□ 0.87
Smarce1O54941 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarce1O54941 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarce1O54941 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarce1O54941 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.46■□□□□ 0.87
Smarce1O54941 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smarce1O54941 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarce1O54941 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarce1O54941 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarce1O54941 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smarce1O54941 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Smarce1O54941 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarce1O54941 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarce1O54941 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarce1O54941 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarce1O54941 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.45■□□□□ 0.86
Smarce1O54941 Gm37179-201ENSMUST00000194862 823 ntBASIC20.45■□□□□ 0.86
Smarce1O54941 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.45■□□□□ 0.86
Smarce1O54941 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarce1O54941 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Smarce1O54941 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarce1O54941 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarce1O54941 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarce1O54941 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarce1O54941 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarce1O54941 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarce1O54941 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarce1O54941 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Smarce1O54941 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarce1O54941 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarce1O54941 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarce1O54941 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smarce1O54941 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarce1O54941 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Smarce1O54941 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Smarce1O54941 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarce1O54941 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarce1O54941 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Smarce1O54941 Haglr-201ENSMUST00000100000 2085 ntBASIC20.44■□□□□ 0.86
Smarce1O54941 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Smarce1O54941 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smarce1O54941 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.44■□□□□ 0.86
Smarce1O54941 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Smarce1O54941 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Smarce1O54941 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarce1O54941 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.43■□□□□ 0.86
Smarce1O54941 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.43■□□□□ 0.86
Smarce1O54941 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarce1O54941 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Smarce1O54941 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarce1O54941 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms