Protein–RNA interactions for Protein: O35902

Dsg3, Desmoglein-3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dsg3O35902 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dsg3O35902 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dsg3O35902 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dsg3O35902 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Dsg3O35902 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dsg3O35902 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Dsg3O35902 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dsg3O35902 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.37■□□□□ 0.53
Dsg3O35902 Gm7213-201ENSMUST00000215977 950 ntBASIC18.37■□□□□ 0.53
Dsg3O35902 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dsg3O35902 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dsg3O35902 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Dsg3O35902 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dsg3O35902 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dsg3O35902 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dsg3O35902 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dsg3O35902 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dsg3O35902 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dsg3O35902 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dsg3O35902 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dsg3O35902 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dsg3O35902 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Dsg3O35902 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Dsg3O35902 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dsg3O35902 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dsg3O35902 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dsg3O35902 Gm29791-202ENSMUST00000207888 369 ntBASIC18.36■□□□□ 0.53
Dsg3O35902 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Dsg3O35902 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dsg3O35902 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dsg3O35902 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dsg3O35902 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dsg3O35902 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dsg3O35902 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dsg3O35902 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dsg3O35902 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Dsg3O35902 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dsg3O35902 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dsg3O35902 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dsg3O35902 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dsg3O35902 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Dsg3O35902 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Dsg3O35902 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dsg3O35902 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Dsg3O35902 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dsg3O35902 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dsg3O35902 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dsg3O35902 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dsg3O35902 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Dsg3O35902 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Dsg3O35902 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.35■□□□□ 0.53
Dsg3O35902 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dsg3O35902 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dsg3O35902 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dsg3O35902 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dsg3O35902 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dsg3O35902 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.35■□□□□ 0.53
Dsg3O35902 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dsg3O35902 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Dsg3O35902 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Dsg3O35902 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.35■□□□□ 0.53
Dsg3O35902 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dsg3O35902 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dsg3O35902 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dsg3O35902 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dsg3O35902 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dsg3O35902 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Dsg3O35902 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dsg3O35902 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dsg3O35902 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dsg3O35902 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Dsg3O35902 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dsg3O35902 Gm13401-201ENSMUST00000117074 291 ntBASIC18.34■□□□□ 0.53
Dsg3O35902 Gm44771-201ENSMUST00000206975 626 ntBASIC18.34■□□□□ 0.53
Dsg3O35902 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dsg3O35902 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Dsg3O35902 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dsg3O35902 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Dsg3O35902 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dsg3O35902 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Dsg3O35902 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Dsg3O35902 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Dsg3O35902 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Dsg3O35902 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Dsg3O35902 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Dsg3O35902 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Dsg3O35902 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Dsg3O35902 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Dsg3O35902 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Dsg3O35902 Gm10418-201ENSMUST00000100943 576 ntBASIC18.33■□□□□ 0.52
Dsg3O35902 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Dsg3O35902 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Dsg3O35902 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Dsg3O35902 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.32■□□□□ 0.52
Dsg3O35902 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Dsg3O35902 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.32■□□□□ 0.52
Dsg3O35902 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Dsg3O35902 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Dsg3O35902 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Dsg3O35902 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms