Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn6O35454 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn6O35454 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn6O35454 Gm5264-201ENSMUST00000190584 848 ntBASIC18.32■□□□□ 0.52
Clcn6O35454 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Clcn6O35454 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC18.32■□□□□ 0.52
Clcn6O35454 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn6O35454 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn6O35454 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn6O35454 Tgds-204ENSMUST00000228543 1594 ntBASIC18.32■□□□□ 0.52
Clcn6O35454 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn6O35454 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn6O35454 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn6O35454 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Clcn6O35454 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn6O35454 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn6O35454 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn6O35454 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn6O35454 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn6O35454 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.32■□□□□ 0.52
Clcn6O35454 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn6O35454 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn6O35454 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn6O35454 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn6O35454 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn6O35454 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Clcn6O35454 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Clcn6O35454 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn6O35454 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn6O35454 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.31■□□□□ 0.52
Clcn6O35454 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn6O35454 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
Clcn6O35454 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC18.31■□□□□ 0.52
Clcn6O35454 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.31■□□□□ 0.52
Clcn6O35454 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Clcn6O35454 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.31■□□□□ 0.52
Clcn6O35454 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Clcn6O35454 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Clcn6O35454 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn6O35454 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn6O35454 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn6O35454 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn6O35454 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.31■□□□□ 0.52
Clcn6O35454 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn6O35454 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Clcn6O35454 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.3■□□□□ 0.52
Clcn6O35454 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn6O35454 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn6O35454 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.3■□□□□ 0.52
Clcn6O35454 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Clcn6O35454 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Clcn6O35454 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn6O35454 Gm14301-201ENSMUST00000120181 324 ntBASIC18.3■□□□□ 0.52
Clcn6O35454 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Clcn6O35454 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn6O35454 Gm23958-201ENSMUST00000157207 105 ntBASIC18.3■□□□□ 0.52
Clcn6O35454 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.3■□□□□ 0.52
Clcn6O35454 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC18.3■□□□□ 0.52
Clcn6O35454 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Clcn6O35454 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC18.3■□□□□ 0.52
Clcn6O35454 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.3■□□□□ 0.52
Clcn6O35454 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.3■□□□□ 0.52
Clcn6O35454 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn6O35454 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn6O35454 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn6O35454 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn6O35454 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn6O35454 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn6O35454 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Clcn6O35454 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn6O35454 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn6O35454 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn6O35454 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn6O35454 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Clcn6O35454 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.29■□□□□ 0.52
Clcn6O35454 Gm4207-201ENSMUST00000173144 960 ntBASIC18.29■□□□□ 0.52
Clcn6O35454 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Clcn6O35454 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Clcn6O35454 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.29■□□□□ 0.52
Clcn6O35454 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn6O35454 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn6O35454 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn6O35454 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn6O35454 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn6O35454 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn6O35454 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn6O35454 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn6O35454 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn6O35454 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Clcn6O35454 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn6O35454 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn6O35454 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn6O35454 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn6O35454 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn6O35454 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn6O35454 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.28■□□□□ 0.52
Clcn6O35454 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn6O35454 Gm6365-201ENSMUST00000054711 744 ntBASIC18.28■□□□□ 0.52
Clcn6O35454 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn6O35454 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms