Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf11O35235 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfsf11O35235 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf11O35235 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf11O35235 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf11O35235 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf11O35235 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf11O35235 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.46□□□□□ -0.25
Tnfsf11O35235 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfsf11O35235 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.46□□□□□ -0.25
Tnfsf11O35235 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.46□□□□□ -0.25
Tnfsf11O35235 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.46□□□□□ -0.25
Tnfsf11O35235 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.46□□□□□ -0.25
Tnfsf11O35235 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.46□□□□□ -0.25
Tnfsf11O35235 Gm9988-201ENSMUST00000069786 435 ntBASIC13.46□□□□□ -0.25
Tnfsf11O35235 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.46□□□□□ -0.25
Tnfsf11O35235 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Tnfsf11O35235 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfsf11O35235 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfsf11O35235 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfsf11O35235 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfsf11O35235 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.45□□□□□ -0.26
Tnfsf11O35235 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfsf11O35235 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Tnfsf11O35235 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfsf11O35235 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.44□□□□□ -0.26
Tnfsf11O35235 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Reep4-203ENSMUST00000226563 1444 ntBASIC13.44□□□□□ -0.26
Tnfsf11O35235 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfsf11O35235 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfsf11O35235 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms