Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Alx4O35137 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Alx4O35137 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Alx4O35137 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Alx4O35137 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.34■□□□□ 0.05
Alx4O35137 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Alx4O35137 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
Alx4O35137 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.34■□□□□ 0.05
Alx4O35137 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.34■□□□□ 0.05
Alx4O35137 Rab3c-203ENSMUST00000224180 967 ntBASIC15.34■□□□□ 0.05
Alx4O35137 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Gm5874-201ENSMUST00000096101 508 ntBASIC15.34■□□□□ 0.05
Alx4O35137 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Alx4O35137 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Alx4O35137 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx4O35137 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Alx4O35137 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Alx4O35137 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Alx4O35137 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx4O35137 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx4O35137 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx4O35137 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx4O35137 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.33■□□□□ 0.04
Alx4O35137 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx4O35137 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.33■□□□□ 0.04
Alx4O35137 Gm10138-203ENSMUST00000206952 366 ntBASIC15.33■□□□□ 0.04
Alx4O35137 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.33■□□□□ 0.04
Alx4O35137 Mtag2-201ENSMUST00000058665 714 ntBASIC15.33■□□□□ 0.04
Alx4O35137 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx4O35137 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Alx4O35137 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Alx4O35137 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Alx4O35137 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.33■□□□□ 0.04
Alx4O35137 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx4O35137 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx4O35137 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx4O35137 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx4O35137 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx4O35137 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Alx4O35137 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx4O35137 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Alx4O35137 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx4O35137 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Alx4O35137 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx4O35137 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx4O35137 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Alx4O35137 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Alx4O35137 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx4O35137 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.32■□□□□ 0.04
Alx4O35137 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx4O35137 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.32■□□□□ 0.04
Alx4O35137 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.32■□□□□ 0.04
Alx4O35137 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Alx4O35137 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Alx4O35137 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx4O35137 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx4O35137 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Alx4O35137 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx4O35137 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx4O35137 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx4O35137 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Alx4O35137 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx4O35137 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx4O35137 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx4O35137 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx4O35137 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx4O35137 Gm10849-201ENSMUST00000100397 618 ntBASIC15.31■□□□□ 0.04
Alx4O35137 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Alx4O35137 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx4O35137 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Alx4O35137 Gm6576-201ENSMUST00000169678 883 ntBASIC15.31■□□□□ 0.04
Alx4O35137 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Alx4O35137 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Alx4O35137 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Alx4O35137 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Alx4O35137 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx4O35137 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx4O35137 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx4O35137 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Alx4O35137 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx4O35137 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms