Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sh2b3O09039 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2b3O09039 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.32■□□□□ 0.04
Sh2b3O09039 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2b3O09039 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2b3O09039 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.31■□□□□ 0.04
Sh2b3O09039 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2b3O09039 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2b3O09039 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2b3O09039 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.31■□□□□ 0.04
Sh2b3O09039 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.31■□□□□ 0.04
Sh2b3O09039 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2b3O09039 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2b3O09039 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2b3O09039 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.31■□□□□ 0.04
Sh2b3O09039 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2b3O09039 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2b3O09039 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2b3O09039 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.31■□□□□ 0.04
Sh2b3O09039 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.31■□□□□ 0.04
Sh2b3O09039 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2b3O09039 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2b3O09039 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2b3O09039 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2b3O09039 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2b3O09039 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2b3O09039 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2b3O09039 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2b3O09039 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.3■□□□□ 0.04
Sh2b3O09039 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Sh2b3O09039 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.3■□□□□ 0.04
Sh2b3O09039 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2b3O09039 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2b3O09039 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2b3O09039 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2b3O09039 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2b3O09039 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2b3O09039 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2b3O09039 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2b3O09039 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2b3O09039 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2b3O09039 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2b3O09039 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.29■□□□□ 0.04
Sh2b3O09039 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.29■□□□□ 0.04
Sh2b3O09039 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2b3O09039 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2b3O09039 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2b3O09039 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2b3O09039 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sh2b3O09039 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2b3O09039 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2b3O09039 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sh2b3O09039 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh2b3O09039 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2b3O09039 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2b3O09039 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh2b3O09039 Gm8969-201ENSMUST00000199694 526 ntBASIC15.29■□□□□ 0.04
Sh2b3O09039 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Sh2b3O09039 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2b3O09039 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2b3O09039 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2b3O09039 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2b3O09039 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2b3O09039 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2b3O09039 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2b3O09039 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2b3O09039 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2b3O09039 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2b3O09039 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2b3O09039 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2b3O09039 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2b3O09039 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2b3O09039 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2b3O09039 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2b3O09039 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2b3O09039 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2b3O09039 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sh2b3O09039 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2b3O09039 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.28■□□□□ 0.04
Sh2b3O09039 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2b3O09039 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.28■□□□□ 0.04
Sh2b3O09039 Mir2861-201ENSMUST00000175539 82 ntBASIC15.28■□□□□ 0.04
Sh2b3O09039 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2b3O09039 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2b3O09039 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2b3O09039 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sh2b3O09039 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2b3O09039 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2b3O09039 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2b3O09039 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2b3O09039 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2b3O09039 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2b3O09039 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Sh2b3O09039 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2b3O09039 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Sh2b3O09039 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2b3O09039 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2b3O09039 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.27■□□□□ 0.04
Sh2b3O09039 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2b3O09039 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms