Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf3O08791 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf3O08791 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.85■□□□□ 0.45
Ebf3O08791 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf3O08791 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf3O08791 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ebf3O08791 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf3O08791 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf3O08791 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf3O08791 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf3O08791 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf3O08791 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ebf3O08791 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Ebf3O08791 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf3O08791 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf3O08791 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf3O08791 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf3O08791 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ebf3O08791 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf3O08791 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.84■□□□□ 0.45
Ebf3O08791 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.84■□□□□ 0.45
Ebf3O08791 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf3O08791 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.84■□□□□ 0.45
Ebf3O08791 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.84■□□□□ 0.45
Ebf3O08791 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf3O08791 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf3O08791 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Ebf3O08791 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf3O08791 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.84■□□□□ 0.45
Ebf3O08791 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf3O08791 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ebf3O08791 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf3O08791 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf3O08791 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ebf3O08791 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ebf3O08791 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.83■□□□□ 0.45
Ebf3O08791 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.45
Ebf3O08791 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ebf3O08791 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ebf3O08791 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ebf3O08791 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ebf3O08791 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ebf3O08791 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.83■□□□□ 0.44
Ebf3O08791 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ebf3O08791 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.83■□□□□ 0.44
Ebf3O08791 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ebf3O08791 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ebf3O08791 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ebf3O08791 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ebf3O08791 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.83■□□□□ 0.44
Ebf3O08791 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.83■□□□□ 0.44
Ebf3O08791 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ebf3O08791 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ebf3O08791 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Ebf3O08791 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ebf3O08791 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf3O08791 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf3O08791 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Ebf3O08791 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf3O08791 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf3O08791 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf3O08791 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf3O08791 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ebf3O08791 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf3O08791 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf3O08791 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf3O08791 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf3O08791 Gm13474-201ENSMUST00000122466 815 ntBASIC17.82■□□□□ 0.44
Ebf3O08791 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ebf3O08791 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf3O08791 Gm27741-201ENSMUST00000185060 237 ntBASIC17.82■□□□□ 0.44
Ebf3O08791 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf3O08791 Gm29791-202ENSMUST00000207888 369 ntBASIC17.82■□□□□ 0.44
Ebf3O08791 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf3O08791 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf3O08791 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf3O08791 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf3O08791 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf3O08791 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf3O08791 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ebf3O08791 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Ebf3O08791 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ebf3O08791 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ebf3O08791 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ebf3O08791 Gm25016-201ENSMUST00000158399 131 ntBASIC17.81■□□□□ 0.44
Ebf3O08791 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ebf3O08791 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ebf3O08791 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ebf3O08791 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ebf3O08791 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ebf3O08791 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.81■□□□□ 0.44
Ebf3O08791 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ebf3O08791 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ebf3O08791 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ebf3O08791 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ebf3O08791 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.8■□□□□ 0.44
Ebf3O08791 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ebf3O08791 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ebf3O08791 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ebf3O08791 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms