Protein–RNA interactions for Protein: O08750

Nfil3, Nuclear factor interleukin-3-regulated protein, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfil3O08750 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Nfil3O08750 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Nfil3O08750 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 Gm10231-201ENSMUST00000181584 441 ntBASIC19.76■□□□□ 0.75
Nfil3O08750 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 Gm8969-201ENSMUST00000199694 526 ntBASIC19.76■□□□□ 0.75
Nfil3O08750 Gm10175-202ENSMUST00000208752 441 ntBASIC19.76■□□□□ 0.75
Nfil3O08750 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Nfil3O08750 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Nfil3O08750 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Nfil3O08750 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nfil3O08750 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nfil3O08750 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nfil3O08750 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nfil3O08750 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nfil3O08750 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nfil3O08750 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nfil3O08750 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nfil3O08750 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.75■□□□□ 0.75
Nfil3O08750 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nfil3O08750 Gm18959-201ENSMUST00000208954 655 ntBASIC19.75■□□□□ 0.75
Nfil3O08750 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.75■□□□□ 0.75
Nfil3O08750 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nfil3O08750 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nfil3O08750 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nfil3O08750 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nfil3O08750 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Nfil3O08750 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Nfil3O08750 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfil3O08750 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nfil3O08750 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfil3O08750 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfil3O08750 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfil3O08750 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfil3O08750 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfil3O08750 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.74■□□□□ 0.75
Nfil3O08750 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfil3O08750 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfil3O08750 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfil3O08750 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfil3O08750 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Nfil3O08750 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Nfil3O08750 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.74■□□□□ 0.75
Nfil3O08750 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nfil3O08750 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.74■□□□□ 0.75
Nfil3O08750 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfil3O08750 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfil3O08750 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfil3O08750 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Nfil3O08750 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfil3O08750 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfil3O08750 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfil3O08750 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nfil3O08750 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfil3O08750 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nfil3O08750 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nfil3O08750 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nfil3O08750 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nfil3O08750 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nfil3O08750 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nfil3O08750 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.73■□□□□ 0.75
Nfil3O08750 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nfil3O08750 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Nfil3O08750 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nfil3O08750 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nfil3O08750 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Nfil3O08750 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nfil3O08750 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.73■□□□□ 0.75
Nfil3O08750 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nfil3O08750 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nfil3O08750 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nfil3O08750 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nfil3O08750 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.72■□□□□ 0.75
Nfil3O08750 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nfil3O08750 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Nfil3O08750 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nfil3O08750 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.72■□□□□ 0.75
Nfil3O08750 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Nfil3O08750 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.72■□□□□ 0.75
Nfil3O08750 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nfil3O08750 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nfil3O08750 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nfil3O08750 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms