Protein–RNA interactions for Protein: O08665

Sema3a, Semaphorin-3A, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3aO08665 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sema3aO08665 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sema3aO08665 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sema3aO08665 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sema3aO08665 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sema3aO08665 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sema3aO08665 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sema3aO08665 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sema3aO08665 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sema3aO08665 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sema3aO08665 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sema3aO08665 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sema3aO08665 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sema3aO08665 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sema3aO08665 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sema3aO08665 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.38■□□□□ 0.37
Sema3aO08665 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sema3aO08665 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sema3aO08665 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.38■□□□□ 0.37
Sema3aO08665 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sema3aO08665 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sema3aO08665 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.38■□□□□ 0.37
Sema3aO08665 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sema3aO08665 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sema3aO08665 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sema3aO08665 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sema3aO08665 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sema3aO08665 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Sema3aO08665 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sema3aO08665 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.37■□□□□ 0.37
Sema3aO08665 Il3ra-202ENSMUST00000223589 738 ntBASIC17.37■□□□□ 0.37
Sema3aO08665 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sema3aO08665 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sema3aO08665 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sema3aO08665 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.37■□□□□ 0.37
Sema3aO08665 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sema3aO08665 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sema3aO08665 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sema3aO08665 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.37■□□□□ 0.37
Sema3aO08665 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.36■□□□□ 0.37
Sema3aO08665 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sema3aO08665 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.36■□□□□ 0.37
Sema3aO08665 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.36■□□□□ 0.37
Sema3aO08665 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Sema3aO08665 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sema3aO08665 Gm37055-201ENSMUST00000191866 133 ntBASIC17.36■□□□□ 0.37
Sema3aO08665 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.36■□□□□ 0.37
Sema3aO08665 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sema3aO08665 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sema3aO08665 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sema3aO08665 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sema3aO08665 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.36■□□□□ 0.37
Sema3aO08665 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sema3aO08665 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.36■□□□□ 0.37
Sema3aO08665 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sema3aO08665 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Sema3aO08665 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sema3aO08665 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sema3aO08665 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sema3aO08665 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sema3aO08665 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sema3aO08665 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sema3aO08665 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sema3aO08665 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.35■□□□□ 0.37
Sema3aO08665 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sema3aO08665 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sema3aO08665 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sema3aO08665 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Sema3aO08665 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Sema3aO08665 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.35■□□□□ 0.37
Sema3aO08665 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sema3aO08665 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sema3aO08665 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sema3aO08665 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sema3aO08665 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Sema3aO08665 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Sema3aO08665 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sema3aO08665 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sema3aO08665 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sema3aO08665 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Sema3aO08665 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Sema3aO08665 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sema3aO08665 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sema3aO08665 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sema3aO08665 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Sema3aO08665 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sema3aO08665 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sema3aO08665 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sema3aO08665 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sema3aO08665 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.34■□□□□ 0.37
Sema3aO08665 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sema3aO08665 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sema3aO08665 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sema3aO08665 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sema3aO08665 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sema3aO08665 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sema3aO08665 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sema3aO08665 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sema3aO08665 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sema3aO08665 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms