Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC31.32■■■□□ 2.6
Ccdc180J3QNE4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Ccdc180J3QNE4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Ccdc180J3QNE4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Ccdc180J3QNE4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC31.32■■■□□ 2.6
Ccdc180J3QNE4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
Ccdc180J3QNE4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC31.32■■■□□ 2.6
Ccdc180J3QNE4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
Ccdc180J3QNE4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Ccdc180J3QNE4 Phf7-203ENSMUST00000226565 1971 ntBASIC31.31■■■□□ 2.6
Ccdc180J3QNE4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC31.31■■■□□ 2.6
Ccdc180J3QNE4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
Ccdc180J3QNE4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ccdc180J3QNE4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ccdc180J3QNE4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Ccdc180J3QNE4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ccdc180J3QNE4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
Ccdc180J3QNE4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Ccdc180J3QNE4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC31.3■■■□□ 2.6
Ccdc180J3QNE4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
Ccdc180J3QNE4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Ccdc180J3QNE4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ccdc180J3QNE4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Ccdc180J3QNE4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ccdc180J3QNE4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ccdc180J3QNE4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ccdc180J3QNE4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Ccdc180J3QNE4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC31.29■■■□□ 2.6
Ccdc180J3QNE4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC31.29■■■□□ 2.6
Ccdc180J3QNE4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Ccdc180J3QNE4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ccdc180J3QNE4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC31.29■■■□□ 2.6
Ccdc180J3QNE4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ccdc180J3QNE4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ccdc180J3QNE4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ccdc180J3QNE4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ccdc180J3QNE4 Gm42939-201ENSMUST00000197514 2205 ntBASIC31.29■■■□□ 2.6
Ccdc180J3QNE4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ccdc180J3QNE4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ccdc180J3QNE4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC31.29■■■□□ 2.6
Ccdc180J3QNE4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Ccdc180J3QNE4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
Ccdc180J3QNE4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
Ccdc180J3QNE4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Ccdc180J3QNE4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Ccdc180J3QNE4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Ccdc180J3QNE4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Ccdc180J3QNE4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Ccdc180J3QNE4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Ccdc180J3QNE4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ccdc180J3QNE4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
Ccdc180J3QNE4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ccdc180J3QNE4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Ccdc180J3QNE4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ccdc180J3QNE4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ccdc180J3QNE4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ccdc180J3QNE4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ccdc180J3QNE4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ccdc180J3QNE4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC31.27■■■□□ 2.6
Ccdc180J3QNE4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
Ccdc180J3QNE4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ccdc180J3QNE4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ccdc180J3QNE4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ccdc180J3QNE4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Ccdc180J3QNE4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.6
Ccdc180J3QNE4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC31.26■■■□□ 2.6
Ccdc180J3QNE4 Fam105a-203ENSMUST00000226170 3043 ntBASIC31.26■■■□□ 2.6
Ccdc180J3QNE4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Ccdc180J3QNE4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC31.26■■■□□ 2.59
Ccdc180J3QNE4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Ccdc180J3QNE4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Ccdc180J3QNE4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC31.25■■■□□ 2.59
Ccdc180J3QNE4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ccdc180J3QNE4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ccdc180J3QNE4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
Ccdc180J3QNE4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ccdc180J3QNE4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC31.25■■■□□ 2.59
Ccdc180J3QNE4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC31.25■■■□□ 2.59
Ccdc180J3QNE4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Ccdc180J3QNE4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Ccdc180J3QNE4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Ccdc180J3QNE4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
Ccdc180J3QNE4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ccdc180J3QNE4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC31.23■■■□□ 2.59
Ccdc180J3QNE4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Ccdc180J3QNE4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
Ccdc180J3QNE4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC31.23■■■□□ 2.59
Ccdc180J3QNE4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ccdc180J3QNE4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ccdc180J3QNE4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ccdc180J3QNE4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC31.23■■■□□ 2.59
Ccdc180J3QNE4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
Ccdc180J3QNE4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
Ccdc180J3QNE4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ccdc180J3QNE4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ccdc180J3QNE4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ccdc180J3QNE4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ccdc180J3QNE4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ccdc180J3QNE4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
Ccdc180J3QNE4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC31.22■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms