Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Gm3139J3QK78 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Gm3139J3QK78 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3139J3QK78 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3139J3QK78 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3139J3QK78 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Gm3139J3QK78 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3139J3QK78 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Gm3139J3QK78 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3139J3QK78 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3139J3QK78 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3139J3QK78 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3139J3QK78 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.17■□□□□ 0.34
Gm3139J3QK78 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Gm3139J3QK78 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3139J3QK78 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3139J3QK78 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Gm3139J3QK78 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Gm3139J3QK78 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Gm3139J3QK78 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3139J3QK78 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3139J3QK78 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3139J3QK78 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3139J3QK78 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Gm3139J3QK78 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.16■□□□□ 0.34
Gm3139J3QK78 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3139J3QK78 Gm7977-201ENSMUST00000193787 748 ntBASIC17.16■□□□□ 0.34
Gm3139J3QK78 Gm7370-201ENSMUST00000219471 767 ntBASIC17.16■□□□□ 0.34
Gm3139J3QK78 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3139J3QK78 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Gm3139J3QK78 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Gm3139J3QK78 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3139J3QK78 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Gm3139J3QK78 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3139J3QK78 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3139J3QK78 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm3139J3QK78 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3139J3QK78 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3139J3QK78 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Gm3139J3QK78 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm3139J3QK78 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3139J3QK78 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3139J3QK78 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3139J3QK78 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.15■□□□□ 0.34
Gm3139J3QK78 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.15■□□□□ 0.34
Gm3139J3QK78 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3139J3QK78 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
Gm3139J3QK78 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.15■□□□□ 0.34
Gm3139J3QK78 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.15■□□□□ 0.34
Gm3139J3QK78 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3139J3QK78 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3139J3QK78 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3139J3QK78 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3139J3QK78 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3139J3QK78 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3139J3QK78 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3139J3QK78 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Gm3139J3QK78 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gm3139J3QK78 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3139J3QK78 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3139J3QK78 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.14■□□□□ 0.33
Gm3139J3QK78 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3139J3QK78 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3139J3QK78 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gm3139J3QK78 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3139J3QK78 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm3139J3QK78 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3139J3QK78 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3139J3QK78 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.14■□□□□ 0.33
Gm3139J3QK78 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3139J3QK78 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3139J3QK78 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm3139J3QK78 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3139J3QK78 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gm3139J3QK78 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gm3139J3QK78 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3139J3QK78 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3139J3QK78 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3139J3QK78 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3139J3QK78 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm3139J3QK78 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3139J3QK78 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3139J3QK78 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3139J3QK78 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Gm3139J3QK78 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm3139J3QK78 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3139J3QK78 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Gm3139J3QK78 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Gm3139J3QK78 Gm18958-201ENSMUST00000174258 762 ntBASIC17.13■□□□□ 0.33
Gm3139J3QK78 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3139J3QK78 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.13■□□□□ 0.33
Gm3139J3QK78 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3139J3QK78 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm3139J3QK78 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Gm3139J3QK78 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.13■□□□□ 0.33
Gm3139J3QK78 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3139J3QK78 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3139J3QK78 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3139J3QK78 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm3139J3QK78 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms