Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh9F8VPK8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh9F8VPK8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh9F8VPK8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh9F8VPK8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh9F8VPK8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh9F8VPK8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdh9F8VPK8 Gm13216-201ENSMUST00000117145 591 ntBASIC17.65■□□□□ 0.42
Pcdh9F8VPK8 Gm13158-201ENSMUST00000122007 736 ntBASIC17.65■□□□□ 0.42
Pcdh9F8VPK8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh9F8VPK8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.65■□□□□ 0.42
Pcdh9F8VPK8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh9F8VPK8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh9F8VPK8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh9F8VPK8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh9F8VPK8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh9F8VPK8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh9F8VPK8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh9F8VPK8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdh9F8VPK8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdh9F8VPK8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh9F8VPK8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh9F8VPK8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.64■□□□□ 0.41
Pcdh9F8VPK8 Gm12527-201ENSMUST00000117967 564 ntBASIC17.64■□□□□ 0.41
Pcdh9F8VPK8 Gm27275-201ENSMUST00000184318 272 ntBASIC17.64■□□□□ 0.41
Pcdh9F8VPK8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh9F8VPK8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh9F8VPK8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh9F8VPK8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
Pcdh9F8VPK8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh9F8VPK8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pcdh9F8VPK8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh9F8VPK8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 Gm18025-201ENSMUST00000221733 862 ntBASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh9F8VPK8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh9F8VPK8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh9F8VPK8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh9F8VPK8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdh9F8VPK8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh9F8VPK8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh9F8VPK8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh9F8VPK8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh9F8VPK8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh9F8VPK8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh9F8VPK8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh9F8VPK8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh9F8VPK8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Pcdh9F8VPK8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh9F8VPK8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh9F8VPK8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh9F8VPK8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh9F8VPK8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh9F8VPK8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdh9F8VPK8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh9F8VPK8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdh9F8VPK8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh9F8VPK8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh9F8VPK8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh9F8VPK8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh9F8VPK8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms