Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc188F6WEU2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc188F6WEU2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc188F6WEU2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc188F6WEU2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc188F6WEU2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc188F6WEU2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.42■□□□□ 0.38
Ccdc188F6WEU2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc188F6WEU2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc188F6WEU2 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.42■□□□□ 0.38
Ccdc188F6WEU2 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.42■□□□□ 0.38
Ccdc188F6WEU2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.42■□□□□ 0.38
Ccdc188F6WEU2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc188F6WEU2 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
Ccdc188F6WEU2 Mir6956-201ENSMUST00000183598 62 ntBASIC17.42■□□□□ 0.38
Ccdc188F6WEU2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.42■□□□□ 0.38
Ccdc188F6WEU2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc188F6WEU2 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.42■□□□□ 0.38
Ccdc188F6WEU2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc188F6WEU2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc188F6WEU2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc188F6WEU2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc188F6WEU2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc188F6WEU2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc188F6WEU2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc188F6WEU2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc188F6WEU2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.4■□□□□ 0.38
Ccdc188F6WEU2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Ccdc188F6WEU2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.4■□□□□ 0.38
Ccdc188F6WEU2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Ccdc188F6WEU2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc188F6WEU2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc188F6WEU2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc188F6WEU2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc188F6WEU2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc188F6WEU2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ccdc188F6WEU2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc188F6WEU2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc188F6WEU2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc188F6WEU2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc188F6WEU2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc188F6WEU2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc188F6WEU2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc188F6WEU2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc188F6WEU2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc188F6WEU2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc188F6WEU2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc188F6WEU2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc188F6WEU2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.39■□□□□ 0.37
Ccdc188F6WEU2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc188F6WEU2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc188F6WEU2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc188F6WEU2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Ccdc188F6WEU2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc188F6WEU2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc188F6WEU2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc188F6WEU2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc188F6WEU2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc188F6WEU2 Gm13036-201ENSMUST00000117799 748 ntBASIC17.38■□□□□ 0.37
Ccdc188F6WEU2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc188F6WEU2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc188F6WEU2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.38■□□□□ 0.37
Ccdc188F6WEU2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc188F6WEU2 AV026068-213ENSMUST00000223675 1171 ntBASIC17.38■□□□□ 0.37
Ccdc188F6WEU2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc188F6WEU2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc188F6WEU2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc188F6WEU2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc188F6WEU2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc188F6WEU2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc188F6WEU2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc188F6WEU2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc188F6WEU2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ccdc188F6WEU2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc188F6WEU2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc188F6WEU2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms