Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6F6VAN0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Atf6F6VAN0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.69■□□□□ 0.42
Atf6F6VAN0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.69■□□□□ 0.42
Atf6F6VAN0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6F6VAN0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6F6VAN0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6F6VAN0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6F6VAN0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf6F6VAN0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6F6VAN0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6F6VAN0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6F6VAN0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6F6VAN0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6F6VAN0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6F6VAN0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.68■□□□□ 0.42
Atf6F6VAN0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6F6VAN0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6F6VAN0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6F6VAN0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6F6VAN0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6F6VAN0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Atf6F6VAN0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6F6VAN0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6F6VAN0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6F6VAN0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf6F6VAN0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6F6VAN0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6F6VAN0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6F6VAN0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6F6VAN0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6F6VAN0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Atf6F6VAN0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Atf6F6VAN0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6F6VAN0 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.67■□□□□ 0.42
Atf6F6VAN0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6F6VAN0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.67■□□□□ 0.42
Atf6F6VAN0 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.67■□□□□ 0.42
Atf6F6VAN0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Atf6F6VAN0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6F6VAN0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6F6VAN0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6F6VAN0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atf6F6VAN0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6F6VAN0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6F6VAN0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.66■□□□□ 0.42
Atf6F6VAN0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6F6VAN0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6F6VAN0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6F6VAN0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6F6VAN0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6F6VAN0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.66■□□□□ 0.42
Atf6F6VAN0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6F6VAN0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Atf6F6VAN0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6F6VAN0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6F6VAN0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6F6VAN0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6F6VAN0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Atf6F6VAN0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atf6F6VAN0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Atf6F6VAN0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atf6F6VAN0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Atf6F6VAN0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Atf6F6VAN0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.65■□□□□ 0.42
Atf6F6VAN0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atf6F6VAN0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atf6F6VAN0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atf6F6VAN0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atf6F6VAN0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atf6F6VAN0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Atf6F6VAN0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atf6F6VAN0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.65■□□□□ 0.42
Atf6F6VAN0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atf6F6VAN0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf6F6VAN0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf6F6VAN0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atf6F6VAN0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf6F6VAN0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Atf6F6VAN0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.64■□□□□ 0.41
Atf6F6VAN0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atf6F6VAN0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atf6F6VAN0 Gm27011-201ENSMUST00000182352 972 ntBASIC17.64■□□□□ 0.41
Atf6F6VAN0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atf6F6VAN0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf6F6VAN0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf6F6VAN0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.64■□□□□ 0.41
Atf6F6VAN0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.64■□□□□ 0.41
Atf6F6VAN0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atf6F6VAN0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atf6F6VAN0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atf6F6VAN0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.63■□□□□ 0.41
Atf6F6VAN0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atf6F6VAN0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atf6F6VAN0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atf6F6VAN0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atf6F6VAN0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Atf6F6VAN0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.63■□□□□ 0.41
Atf6F6VAN0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Atf6F6VAN0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms