Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4aE9Q735 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4aE9Q735 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4aE9Q735 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ube4aE9Q735 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4aE9Q735 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4aE9Q735 Gm13186-201ENSMUST00000118031 316 ntBASIC20.69■□□□□ 0.9
Ube4aE9Q735 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.69■□□□□ 0.9
Ube4aE9Q735 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4aE9Q735 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4aE9Q735 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4aE9Q735 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4aE9Q735 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4aE9Q735 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4aE9Q735 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4aE9Q735 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4aE9Q735 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.69■□□□□ 0.9
Ube4aE9Q735 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4aE9Q735 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4aE9Q735 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4aE9Q735 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ube4aE9Q735 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ube4aE9Q735 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ube4aE9Q735 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ube4aE9Q735 Mir3081-201ENSMUST00000175305 84 ntBASIC20.68■□□□□ 0.9
Ube4aE9Q735 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ube4aE9Q735 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ube4aE9Q735 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ube4aE9Q735 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ube4aE9Q735 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ube4aE9Q735 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.67■□□□□ 0.9
Ube4aE9Q735 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.67■□□□□ 0.9
Ube4aE9Q735 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ube4aE9Q735 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.67■□□□□ 0.9
Ube4aE9Q735 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ube4aE9Q735 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ube4aE9Q735 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ube4aE9Q735 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ube4aE9Q735 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.66■□□□□ 0.9
Ube4aE9Q735 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ube4aE9Q735 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ube4aE9Q735 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ube4aE9Q735 Gm11336-201ENSMUST00000118168 334 ntBASIC20.66■□□□□ 0.9
Ube4aE9Q735 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ube4aE9Q735 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ube4aE9Q735 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ube4aE9Q735 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ube4aE9Q735 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ube4aE9Q735 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ube4aE9Q735 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ube4aE9Q735 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ube4aE9Q735 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ube4aE9Q735 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ube4aE9Q735 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ube4aE9Q735 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ube4aE9Q735 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ube4aE9Q735 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ube4aE9Q735 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ube4aE9Q735 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ube4aE9Q735 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ube4aE9Q735 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ube4aE9Q735 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ube4aE9Q735 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Ube4aE9Q735 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ube4aE9Q735 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ube4aE9Q735 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ube4aE9Q735 Olfr129-201ENSMUST00000122318 993 ntBASIC20.64■□□□□ 0.89
Ube4aE9Q735 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ube4aE9Q735 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.64■□□□□ 0.89
Ube4aE9Q735 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ube4aE9Q735 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ube4aE9Q735 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ube4aE9Q735 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Ube4aE9Q735 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.64■□□□□ 0.89
Ube4aE9Q735 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ube4aE9Q735 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ube4aE9Q735 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ube4aE9Q735 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ube4aE9Q735 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ube4aE9Q735 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ube4aE9Q735 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ube4aE9Q735 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ube4aE9Q735 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ube4aE9Q735 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.63■□□□□ 0.89
Ube4aE9Q735 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ube4aE9Q735 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ube4aE9Q735 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ube4aE9Q735 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ube4aE9Q735 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ube4aE9Q735 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.63■□□□□ 0.89
Ube4aE9Q735 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ube4aE9Q735 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.62■□□□□ 0.89
Ube4aE9Q735 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube4aE9Q735 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube4aE9Q735 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube4aE9Q735 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube4aE9Q735 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube4aE9Q735 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ube4aE9Q735 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube4aE9Q735 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms