Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb9E9Q5G2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb9E9Q5G2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb9E9Q5G2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb9E9Q5G2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb9E9Q5G2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb9E9Q5G2 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.25■□□□□ 0.83
Pcdhb9E9Q5G2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb9E9Q5G2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.25■□□□□ 0.83
Pcdhb9E9Q5G2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb9E9Q5G2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb9E9Q5G2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb9E9Q5G2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb9E9Q5G2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.24■□□□□ 0.83
Pcdhb9E9Q5G2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb9E9Q5G2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb9E9Q5G2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb9E9Q5G2 Gm27000-201ENSMUST00000182943 842 ntBASIC20.24■□□□□ 0.83
Pcdhb9E9Q5G2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb9E9Q5G2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb9E9Q5G2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb9E9Q5G2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb9E9Q5G2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb9E9Q5G2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb9E9Q5G2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb9E9Q5G2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb9E9Q5G2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb9E9Q5G2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb9E9Q5G2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhb9E9Q5G2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb9E9Q5G2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb9E9Q5G2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb9E9Q5G2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb9E9Q5G2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.23■□□□□ 0.83
Pcdhb9E9Q5G2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb9E9Q5G2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb9E9Q5G2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb9E9Q5G2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb9E9Q5G2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb9E9Q5G2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb9E9Q5G2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb9E9Q5G2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhb9E9Q5G2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb9E9Q5G2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb9E9Q5G2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
Pcdhb9E9Q5G2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Pcdhb9E9Q5G2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb9E9Q5G2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdhb9E9Q5G2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb9E9Q5G2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb9E9Q5G2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb9E9Q5G2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdhb9E9Q5G2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb9E9Q5G2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.22■□□□□ 0.83
Pcdhb9E9Q5G2 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.22■□□□□ 0.83
Pcdhb9E9Q5G2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb9E9Q5G2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb9E9Q5G2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb9E9Q5G2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb9E9Q5G2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb9E9Q5G2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Pcdhb9E9Q5G2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb9E9Q5G2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.21■□□□□ 0.83
Pcdhb9E9Q5G2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb9E9Q5G2 Gm18958-201ENSMUST00000174258 762 ntBASIC20.21■□□□□ 0.83
Pcdhb9E9Q5G2 Gm7213-201ENSMUST00000215977 950 ntBASIC20.21■□□□□ 0.83
Pcdhb9E9Q5G2 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.21■□□□□ 0.83
Pcdhb9E9Q5G2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb9E9Q5G2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb9E9Q5G2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb9E9Q5G2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb9E9Q5G2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb9E9Q5G2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb9E9Q5G2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb9E9Q5G2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb9E9Q5G2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb9E9Q5G2 Mir1668-201ENSMUST00000184114 107 ntBASIC20.2■□□□□ 0.82
Pcdhb9E9Q5G2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb9E9Q5G2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb9E9Q5G2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb9E9Q5G2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb9E9Q5G2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb9E9Q5G2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb9E9Q5G2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb9E9Q5G2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Gm22697-201ENSMUST00000175194 63 ntBASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb9E9Q5G2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms