Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4lE9Q2N0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cpsf4lE9Q2N0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4lE9Q2N0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4lE9Q2N0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4lE9Q2N0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4lE9Q2N0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 Gm9731-201ENSMUST00000209480 747 ntBASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4lE9Q2N0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4lE9Q2N0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4lE9Q2N0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4lE9Q2N0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cpsf4lE9Q2N0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cpsf4lE9Q2N0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4lE9Q2N0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4lE9Q2N0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4lE9Q2N0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4lE9Q2N0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4lE9Q2N0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.55□□□□□ -0.08
Cpsf4lE9Q2N0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.55□□□□□ -0.08
Cpsf4lE9Q2N0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4lE9Q2N0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4lE9Q2N0 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.55□□□□□ -0.08
Cpsf4lE9Q2N0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4lE9Q2N0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4lE9Q2N0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4lE9Q2N0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4lE9Q2N0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.55□□□□□ -0.08
Cpsf4lE9Q2N0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Gm7791-201ENSMUST00000219066 539 ntBASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms