Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh17E9PXF0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
Pcdh17E9PXF0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh17E9PXF0 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.02■□□□□ 0.15
Pcdh17E9PXF0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh17E9PXF0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh17E9PXF0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh17E9PXF0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh17E9PXF0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh17E9PXF0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh17E9PXF0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh17E9PXF0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh17E9PXF0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh17E9PXF0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdh17E9PXF0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh17E9PXF0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh17E9PXF0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh17E9PXF0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh17E9PXF0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh17E9PXF0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdh17E9PXF0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh17E9PXF0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16■□□□□ 0.15
Pcdh17E9PXF0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh17E9PXF0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Pcdh17E9PXF0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh17E9PXF0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh17E9PXF0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh17E9PXF0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdh17E9PXF0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh17E9PXF0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16■□□□□ 0.15
Pcdh17E9PXF0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh17E9PXF0 Gm16061-201ENSMUST00000122167 857 ntBASIC16■□□□□ 0.15
Pcdh17E9PXF0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh17E9PXF0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16■□□□□ 0.15
Pcdh17E9PXF0 Gm21362-201ENSMUST00000194272 928 ntBASIC16■□□□□ 0.15
Pcdh17E9PXF0 Gm18101-201ENSMUST00000215769 548 ntBASIC16■□□□□ 0.15
Pcdh17E9PXF0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh17E9PXF0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh17E9PXF0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16■□□□□ 0.15
Pcdh17E9PXF0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh17E9PXF0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdh17E9PXF0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh17E9PXF0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pcdh17E9PXF0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh17E9PXF0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh17E9PXF0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdh17E9PXF0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh17E9PXF0 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.99■□□□□ 0.15
Pcdh17E9PXF0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.99■□□□□ 0.15
Pcdh17E9PXF0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh17E9PXF0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.99■□□□□ 0.15
Pcdh17E9PXF0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Pcdh17E9PXF0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Pcdh17E9PXF0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh17E9PXF0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh17E9PXF0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh17E9PXF0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.99■□□□□ 0.15
Pcdh17E9PXF0 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 AA414768-201ENSMUST00000121924 1257 ntBASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Gm22697-201ENSMUST00000175194 63 ntBASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh17E9PXF0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh17E9PXF0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdh17E9PXF0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh17E9PXF0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh17E9PXF0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh17E9PXF0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh17E9PXF0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdh17E9PXF0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh17E9PXF0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh17E9PXF0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdh17E9PXF0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh17E9PXF0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh17E9PXF0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh17E9PXF0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh17E9PXF0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh17E9PXF0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh17E9PXF0 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.96■□□□□ 0.15
Pcdh17E9PXF0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh17E9PXF0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh17E9PXF0 Gm13474-201ENSMUST00000122466 815 ntBASIC15.96■□□□□ 0.15
Pcdh17E9PXF0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms