Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim30cD3YVI9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim30cD3YVI9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim30cD3YVI9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim30cD3YVI9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim30cD3YVI9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim30cD3YVI9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trim30cD3YVI9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim30cD3YVI9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim30cD3YVI9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim30cD3YVI9 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.78■□□□□ 0.6
Trim30cD3YVI9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Trim30cD3YVI9 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.78■□□□□ 0.6
Trim30cD3YVI9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim30cD3YVI9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim30cD3YVI9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.78■□□□□ 0.6
Trim30cD3YVI9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim30cD3YVI9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim30cD3YVI9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim30cD3YVI9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim30cD3YVI9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim30cD3YVI9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim30cD3YVI9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim30cD3YVI9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim30cD3YVI9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim30cD3YVI9 Gm5643-201ENSMUST00000117081 966 ntBASIC18.77■□□□□ 0.6
Trim30cD3YVI9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim30cD3YVI9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim30cD3YVI9 Zfp783-201ENSMUST00000095946 670 ntBASIC18.77■□□□□ 0.6
Trim30cD3YVI9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim30cD3YVI9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim30cD3YVI9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim30cD3YVI9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim30cD3YVI9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim30cD3YVI9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim30cD3YVI9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Gm18666-201ENSMUST00000190039 958 ntBASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trim30cD3YVI9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim30cD3YVI9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim30cD3YVI9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim30cD3YVI9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim30cD3YVI9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim30cD3YVI9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim30cD3YVI9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.75■□□□□ 0.59
Trim30cD3YVI9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trim30cD3YVI9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim30cD3YVI9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.75■□□□□ 0.59
Trim30cD3YVI9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim30cD3YVI9 Gm13158-201ENSMUST00000122007 736 ntBASIC18.75■□□□□ 0.59
Trim30cD3YVI9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim30cD3YVI9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim30cD3YVI9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim30cD3YVI9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim30cD3YVI9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim30cD3YVI9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim30cD3YVI9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms