Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Gm12644-201ENSMUST00000119935 606 ntBASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.74■□□□□ 0.43
Col4a6B1AVK5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a6B1AVK5 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a6B1AVK5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a6B1AVK5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a6B1AVK5 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a6B1AVK5 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a6B1AVK5 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.73■□□□□ 0.43
Col4a6B1AVK5 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a6B1AVK5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a6B1AVK5 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a6B1AVK5 Gm18195-201ENSMUST00000207604 706 ntBASIC17.73■□□□□ 0.43
Col4a6B1AVK5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a6B1AVK5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a6B1AVK5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a6B1AVK5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Col4a6B1AVK5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.73■□□□□ 0.43
Col4a6B1AVK5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a6B1AVK5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.72■□□□□ 0.43
Col4a6B1AVK5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Col4a6B1AVK5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a6B1AVK5 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.72■□□□□ 0.43
Col4a6B1AVK5 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.72■□□□□ 0.43
Col4a6B1AVK5 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a6B1AVK5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.72■□□□□ 0.43
Col4a6B1AVK5 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.72■□□□□ 0.43
Col4a6B1AVK5 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a6B1AVK5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a6B1AVK5 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a6B1AVK5 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a6B1AVK5 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Col4a6B1AVK5 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a6B1AVK5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Col4a6B1AVK5 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a6B1AVK5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
Col4a6B1AVK5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Col4a6B1AVK5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a6B1AVK5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a6B1AVK5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a6B1AVK5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a6B1AVK5 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Col4a6B1AVK5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Col4a6B1AVK5 Gm10052-201ENSMUST00000168019 960 ntBASIC17.71■□□□□ 0.42
Col4a6B1AVK5 Gm7729-201ENSMUST00000050143 801 ntBASIC17.71■□□□□ 0.42
Col4a6B1AVK5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Col4a6B1AVK5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Gm29707-201ENSMUST00000196325 491 ntBASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Gm2651-201ENSMUST00000203560 838 ntBASIC17.7■□□□□ 0.42
Col4a6B1AVK5 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a6B1AVK5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a6B1AVK5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a6B1AVK5 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Col4a6B1AVK5 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a6B1AVK5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Col4a6B1AVK5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a6B1AVK5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Col4a6B1AVK5 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a6B1AVK5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Col4a6B1AVK5 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.69■□□□□ 0.42
Col4a6B1AVK5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a6B1AVK5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a6B1AVK5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a6B1AVK5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a6B1AVK5 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a6B1AVK5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a6B1AVK5 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a6B1AVK5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.68■□□□□ 0.42
Col4a6B1AVK5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a6B1AVK5 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a6B1AVK5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms