Protein–RNA interactions for Protein: A3KMP2

Ttc38, Tetratricopeptide repeat protein 38, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc38A3KMP2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc38A3KMP2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc38A3KMP2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc38A3KMP2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc38A3KMP2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc38A3KMP2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc38A3KMP2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc38A3KMP2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc38A3KMP2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.72■□□□□ 0.59
Ttc38A3KMP2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.72■□□□□ 0.59
Ttc38A3KMP2 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.72■□□□□ 0.59
Ttc38A3KMP2 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.72■□□□□ 0.59
Ttc38A3KMP2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc38A3KMP2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc38A3KMP2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc38A3KMP2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc38A3KMP2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.72■□□□□ 0.59
Ttc38A3KMP2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc38A3KMP2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc38A3KMP2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc38A3KMP2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.71■□□□□ 0.59
Ttc38A3KMP2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Ttc38A3KMP2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc38A3KMP2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.71■□□□□ 0.59
Ttc38A3KMP2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.71■□□□□ 0.59
Ttc38A3KMP2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc38A3KMP2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Ttc38A3KMP2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.71■□□□□ 0.59
Ttc38A3KMP2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.71■□□□□ 0.59
Ttc38A3KMP2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc38A3KMP2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc38A3KMP2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ttc38A3KMP2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc38A3KMP2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc38A3KMP2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc38A3KMP2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc38A3KMP2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc38A3KMP2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc38A3KMP2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc38A3KMP2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc38A3KMP2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc38A3KMP2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc38A3KMP2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc38A3KMP2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Ttc38A3KMP2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc38A3KMP2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc38A3KMP2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.7■□□□□ 0.58
Ttc38A3KMP2 Gm37025-201ENSMUST00000195159 829 ntBASIC18.7■□□□□ 0.58
Ttc38A3KMP2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc38A3KMP2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc38A3KMP2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc38A3KMP2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc38A3KMP2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc38A3KMP2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Ttc38A3KMP2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Ttc38A3KMP2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ttc38A3KMP2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Gm17661-201ENSMUST00000170317 270 ntBASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Gm10812-201ENSMUST00000099864 546 ntBASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Ttc38A3KMP2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ttc38A3KMP2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc38A3KMP2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ttc38A3KMP2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc38A3KMP2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc38A3KMP2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc38A3KMP2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc38A3KMP2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc38A3KMP2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc38A3KMP2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc38A3KMP2 Gm715-201ENSMUST00000117865 831 ntBASIC18.68■□□□□ 0.58
Ttc38A3KMP2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc38A3KMP2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.68■□□□□ 0.58
Ttc38A3KMP2 Gm38027-201ENSMUST00000192315 235 ntBASIC18.68■□□□□ 0.58
Ttc38A3KMP2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ttc38A3KMP2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc38A3KMP2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ttc38A3KMP2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc38A3KMP2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc38A3KMP2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.68■□□□□ 0.58
Ttc38A3KMP2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms