Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd6A3KFM7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.01□□□□□ -0.17
Chd6A3KFM7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd6A3KFM7 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd6A3KFM7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Chd6A3KFM7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Chd6A3KFM7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd6A3KFM7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd6A3KFM7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd6A3KFM7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Chd6A3KFM7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chd6A3KFM7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chd6A3KFM7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14□□□□□ -0.17
Chd6A3KFM7 Gm6550-201ENSMUST00000187574 993 ntBASIC14□□□□□ -0.17
Chd6A3KFM7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14□□□□□ -0.17
Chd6A3KFM7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Chd6A3KFM7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd6A3KFM7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chd6A3KFM7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd6A3KFM7 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14□□□□□ -0.17
Chd6A3KFM7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chd6A3KFM7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14□□□□□ -0.17
Chd6A3KFM7 Cmtm5-203ENSMUST00000227441 610 ntBASIC14□□□□□ -0.17
Chd6A3KFM7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chd6A3KFM7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd6A3KFM7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd6A3KFM7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14□□□□□ -0.17
Chd6A3KFM7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd6A3KFM7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Chd6A3KFM7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Chd6A3KFM7 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Chd6A3KFM7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd6A3KFM7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd6A3KFM7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chd6A3KFM7 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Chd6A3KFM7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd6A3KFM7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd6A3KFM7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd6A3KFM7 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Chd6A3KFM7 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.99□□□□□ -0.17
Chd6A3KFM7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Chd6A3KFM7 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.99□□□□□ -0.17
Chd6A3KFM7 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.99□□□□□ -0.17
Chd6A3KFM7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd6A3KFM7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.99□□□□□ -0.17
Chd6A3KFM7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd6A3KFM7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd6A3KFM7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Chd6A3KFM7 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chd6A3KFM7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.99□□□□□ -0.17
Chd6A3KFM7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd6A3KFM7 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.99□□□□□ -0.17
Chd6A3KFM7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Chd6A3KFM7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd6A3KFM7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd6A3KFM7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd6A3KFM7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd6A3KFM7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.98□□□□□ -0.17
Chd6A3KFM7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd6A3KFM7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chd6A3KFM7 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd6A3KFM7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chd6A3KFM7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Chd6A3KFM7 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chd6A3KFM7 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.98□□□□□ -0.17
Chd6A3KFM7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd6A3KFM7 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd6A3KFM7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd6A3KFM7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.98□□□□□ -0.17
Chd6A3KFM7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Chd6A3KFM7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chd6A3KFM7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chd6A3KFM7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Chd6A3KFM7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd6A3KFM7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd6A3KFM7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd6A3KFM7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chd6A3KFM7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd6A3KFM7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd6A3KFM7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd6A3KFM7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chd6A3KFM7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd6A3KFM7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd6A3KFM7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chd6A3KFM7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chd6A3KFM7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd6A3KFM7 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chd6A3KFM7 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.97□□□□□ -0.17
Chd6A3KFM7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd6A3KFM7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd6A3KFM7 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.97□□□□□ -0.17
Chd6A3KFM7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chd6A3KFM7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Chd6A3KFM7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Chd6A3KFM7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd6A3KFM7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chd6A3KFM7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.97□□□□□ -0.17
Chd6A3KFM7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chd6A3KFM7 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.97□□□□□ -0.17
Chd6A3KFM7 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms