Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.47□□□□□ -0.09
Col6a4A2AX52 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.47□□□□□ -0.09
Col6a4A2AX52 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.46□□□□□ -0.09
Col6a4A2AX52 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a4A2AX52 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a4A2AX52 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a4A2AX52 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a4A2AX52 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a4A2AX52 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.46□□□□□ -0.09
Col6a4A2AX52 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Col6a4A2AX52 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Col6a4A2AX52 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a4A2AX52 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col6a4A2AX52 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Col6a4A2AX52 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Col6a4A2AX52 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.46□□□□□ -0.1
Col6a4A2AX52 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Col6a4A2AX52 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.46□□□□□ -0.1
Col6a4A2AX52 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Col6a4A2AX52 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.46□□□□□ -0.1
Col6a4A2AX52 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col6a4A2AX52 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a4A2AX52 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.45□□□□□ -0.1
Col6a4A2AX52 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a4A2AX52 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a4A2AX52 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col6a4A2AX52 Gm18206-201ENSMUST00000207027 926 ntBASIC14.44□□□□□ -0.1
Col6a4A2AX52 Gm18195-201ENSMUST00000207604 706 ntBASIC14.44□□□□□ -0.1
Col6a4A2AX52 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a4A2AX52 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a4A2AX52 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Col6a4A2AX52 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a4A2AX52 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a4A2AX52 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a4A2AX52 Gm10418-201ENSMUST00000100943 576 ntBASIC14.44□□□□□ -0.1
Col6a4A2AX52 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a4A2AX52 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a4A2AX52 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Col6a4A2AX52 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a4A2AX52 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.44□□□□□ -0.1
Col6a4A2AX52 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.44□□□□□ -0.1
Col6a4A2AX52 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a4A2AX52 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col6a4A2AX52 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a4A2AX52 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a4A2AX52 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a4A2AX52 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col6a4A2AX52 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a4A2AX52 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Col6a4A2AX52 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Col6a4A2AX52 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a4A2AX52 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a4A2AX52 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.43□□□□□ -0.1
Col6a4A2AX52 Tgds-204ENSMUST00000228543 1594 ntBASIC14.43□□□□□ -0.1
Col6a4A2AX52 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a4A2AX52 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a4A2AX52 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col6a4A2AX52 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a4A2AX52 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Col6a4A2AX52 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms