Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Gm15375-201ENSMUST00000119510 849 ntBASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Gm2559-201ENSMUST00000201323 363 ntBASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Gm4968-201ENSMUST00000071458 858 ntBASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Gm6576-201ENSMUST00000169678 883 ntBASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-1A0N8R1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Gm27405-201ENSMUST00000184201 112 ntBASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Gm8495-201ENSMUST00000188740 694 ntBASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav12-1A0N8R1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Gm12933-201ENSMUST00000120203 872 ntBASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-1A0N8R1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms