Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.2■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.19■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Gm13836-201ENSMUST00000121159 501 ntBASIC18.19■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.19■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.18■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.18■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.18■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Gm18959-201ENSMUST00000208954 655 ntBASIC18.17■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.17■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.16■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.16■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.16■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.16■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.16■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.16■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Mindy4b-psA0A1W2P7H6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mindy4b-psA0A1W2P7H6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms