Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Gm10517-202ENSMUST00000192970 758 ntBASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lnp1A0A1B0GSK3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lnp1A0A1B0GSK3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lnp1A0A1B0GSK3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lnp1A0A1B0GSK3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.33□□□□□ -0.12
Lnp1A0A1B0GSK3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lnp1A0A1B0GSK3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.33□□□□□ -0.12
Lnp1A0A1B0GSK3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lnp1A0A1B0GSK3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.33□□□□□ -0.12
Lnp1A0A1B0GSK3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Lnp1A0A1B0GSK3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lnp1A0A1B0GSK3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Lnp1A0A1B0GSK3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lnp1A0A1B0GSK3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lnp1A0A1B0GSK3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Lnp1A0A1B0GSK3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lnp1A0A1B0GSK3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lnp1A0A1B0GSK3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lnp1A0A1B0GSK3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lnp1A0A1B0GSK3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.33□□□□□ -0.12
Lnp1A0A1B0GSK3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lnp1A0A1B0GSK3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lnp1A0A1B0GSK3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lnp1A0A1B0GSK3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lnp1A0A1B0GSK3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Lnp1A0A1B0GSK3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lnp1A0A1B0GSK3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lnp1A0A1B0GSK3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lnp1A0A1B0GSK3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Lnp1A0A1B0GSK3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lnp1A0A1B0GSK3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Lnp1A0A1B0GSK3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Lnp1A0A1B0GSK3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lnp1A0A1B0GSK3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lnp1A0A1B0GSK3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lnp1A0A1B0GSK3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lnp1A0A1B0GSK3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lnp1A0A1B0GSK3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lnp1A0A1B0GSK3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.31□□□□□ -0.12
Lnp1A0A1B0GSK3 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Lnp1A0A1B0GSK3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms