Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC36.16■■■■□ 3.38
Gm35339A0A140LHH9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC36.16■■■■□ 3.38
Gm35339A0A140LHH9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC36.15■■■■□ 3.38
Gm35339A0A140LHH9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC36.15■■■■□ 3.38
Gm35339A0A140LHH9 Golph3-205ENSMUST00000228671 2842 ntBASIC36.15■■■■□ 3.38
Gm35339A0A140LHH9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC36.15■■■■□ 3.38
Gm35339A0A140LHH9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC36.15■■■■□ 3.38
Gm35339A0A140LHH9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC36.14■■■■□ 3.38
Gm35339A0A140LHH9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC36.14■■■■□ 3.38
Gm35339A0A140LHH9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
Gm35339A0A140LHH9 Gm43575-201ENSMUST00000196420 516 ntBASIC36.14■■■■□ 3.38
Gm35339A0A140LHH9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC36.14■■■■□ 3.38
Gm35339A0A140LHH9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
Gm35339A0A140LHH9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
Gm35339A0A140LHH9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.38
Gm35339A0A140LHH9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC36.13■■■■□ 3.37
Gm35339A0A140LHH9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Gm35339A0A140LHH9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
Gm35339A0A140LHH9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Gm35339A0A140LHH9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC36.13■■■■□ 3.37
Gm35339A0A140LHH9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC36.12■■■■□ 3.37
Gm35339A0A140LHH9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC36.12■■■■□ 3.37
Gm35339A0A140LHH9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC36.12■■■■□ 3.37
Gm35339A0A140LHH9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
Gm35339A0A140LHH9 Gm35558-201ENSMUST00000222675 2219 ntBASIC36.12■■■■□ 3.37
Gm35339A0A140LHH9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC36.12■■■■□ 3.37
Gm35339A0A140LHH9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC36.12■■■■□ 3.37
Gm35339A0A140LHH9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
Gm35339A0A140LHH9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC36.12■■■■□ 3.37
Gm35339A0A140LHH9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC36.12■■■■□ 3.37
Gm35339A0A140LHH9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC36.11■■■■□ 3.37
Gm35339A0A140LHH9 Gm43545-201ENSMUST00000196765 2779 ntBASIC36.11■■■■□ 3.37
Gm35339A0A140LHH9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC36.11■■■■□ 3.37
Gm35339A0A140LHH9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC36.11■■■■□ 3.37
Gm35339A0A140LHH9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
Gm35339A0A140LHH9 Gm44430-201ENSMUST00000203376 995 ntBASIC36.11■■■■□ 3.37
Gm35339A0A140LHH9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC36.11■■■■□ 3.37
Gm35339A0A140LHH9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC36.11■■■■□ 3.37
Gm35339A0A140LHH9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
Gm35339A0A140LHH9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
Gm35339A0A140LHH9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
Gm35339A0A140LHH9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC36.11■■■■□ 3.37
Gm35339A0A140LHH9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
Gm35339A0A140LHH9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
Gm35339A0A140LHH9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC36.1■■■■□ 3.37
Gm35339A0A140LHH9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC36.1■■■■□ 3.37
Gm35339A0A140LHH9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC36.1■■■■□ 3.37
Gm35339A0A140LHH9 Zfp264-201ENSMUST00000208656 1563 ntBASIC36.1■■■■□ 3.37
Gm35339A0A140LHH9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC36.1■■■■□ 3.37
Gm35339A0A140LHH9 Gm25911-201ENSMUST00000157621 56 ntBASIC36.09■■■■□ 3.37
Gm35339A0A140LHH9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC36.09■■■■□ 3.37
Gm35339A0A140LHH9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC36.09■■■■□ 3.37
Gm35339A0A140LHH9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC36.08■■■■□ 3.37
Gm35339A0A140LHH9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC36.08■■■■□ 3.37
Gm35339A0A140LHH9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Gm35339A0A140LHH9 Gm14140-201ENSMUST00000119999 995 ntBASIC36.08■■■■□ 3.37
Gm35339A0A140LHH9 Gm15467-201ENSMUST00000120582 445 ntBASIC36.08■■■■□ 3.37
Gm35339A0A140LHH9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC36.07■■■■□ 3.37
Gm35339A0A140LHH9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC36.07■■■■□ 3.37
Gm35339A0A140LHH9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC36.07■■■■□ 3.36
Gm35339A0A140LHH9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC36.07■■■■□ 3.36
Gm35339A0A140LHH9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC36.07■■■■□ 3.36
Gm35339A0A140LHH9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
Gm35339A0A140LHH9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC36.06■■■■□ 3.36
Gm35339A0A140LHH9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC36.06■■■■□ 3.36
Gm35339A0A140LHH9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC36.06■■■■□ 3.36
Gm35339A0A140LHH9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
Gm35339A0A140LHH9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC36.06■■■■□ 3.36
Gm35339A0A140LHH9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
Gm35339A0A140LHH9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
Gm35339A0A140LHH9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC36.06■■■■□ 3.36
Gm35339A0A140LHH9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
Gm35339A0A140LHH9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
Gm35339A0A140LHH9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC36.06■■■■□ 3.36
Gm35339A0A140LHH9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
Gm35339A0A140LHH9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC36.05■■■■□ 3.36
Gm35339A0A140LHH9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC36.05■■■■□ 3.36
Gm35339A0A140LHH9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
Gm35339A0A140LHH9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
Gm35339A0A140LHH9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
Gm35339A0A140LHH9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC36.05■■■■□ 3.36
Gm35339A0A140LHH9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC36.05■■■■□ 3.36
Gm35339A0A140LHH9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC36.05■■■■□ 3.36
Gm35339A0A140LHH9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC36.05■■■■□ 3.36
Gm35339A0A140LHH9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
Gm35339A0A140LHH9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC36.05■■■■□ 3.36
Gm35339A0A140LHH9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC36.05■■■■□ 3.36
Gm35339A0A140LHH9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC36.04■■■■□ 3.36
Gm35339A0A140LHH9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Gm35339A0A140LHH9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Gm35339A0A140LHH9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC36.04■■■■□ 3.36
Gm35339A0A140LHH9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC36.04■■■■□ 3.36
Gm35339A0A140LHH9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC36.04■■■■□ 3.36
Gm35339A0A140LHH9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Gm35339A0A140LHH9 Gm14494-201ENSMUST00000118786 435 ntBASIC36.04■■■■□ 3.36
Gm35339A0A140LHH9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC36.04■■■■□ 3.36
Gm35339A0A140LHH9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC36.04■■■■□ 3.36
Gm35339A0A140LHH9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC36.04■■■■□ 3.36
Gm35339A0A140LHH9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC36.04■■■■□ 3.36
Gm35339A0A140LHH9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC36.04■■■■□ 3.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms