Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv30A0A0B4J1P1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Gm715-201ENSMUST00000117865 831 ntBASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv30A0A0B4J1P1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Timm23-208ENSMUST00000226683 750 ntBASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv30A0A0B4J1P1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trbv30A0A0B4J1P1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv30A0A0B4J1P1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv30A0A0B4J1P1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv30A0A0B4J1P1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv30A0A0B4J1P1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trbv30A0A0B4J1P1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv30A0A0B4J1P1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv30A0A0B4J1P1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trbv30A0A0B4J1P1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv30A0A0B4J1P1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trbv30A0A0B4J1P1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trbv30A0A0B4J1P1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.96□□□□□ -0.33
Trbv30A0A0B4J1P1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv30A0A0B4J1P1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms