Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav4-3A0A0B4J1K1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Trav4-3A0A0B4J1K1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav4-3A0A0B4J1K1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Trav4-3A0A0B4J1K1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav4-3A0A0B4J1K1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.77□□□□□ -0.52
Trav4-3A0A0B4J1K1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC11.77□□□□□ -0.52
Trav4-3A0A0B4J1K1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav4-3A0A0B4J1K1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav4-3A0A0B4J1K1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav4-3A0A0B4J1K1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav4-3A0A0B4J1K1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gm12922-201ENSMUST00000120626 809 ntBASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gm29791-202ENSMUST00000207888 369 ntBASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gm5812-201ENSMUST00000061073 957 ntBASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav4-3A0A0B4J1K1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gm14026-201ENSMUST00000120625 1789 ntBASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC11.76□□□□□ -0.53
Trav4-3A0A0B4J1K1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav4-3A0A0B4J1K1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4-3A0A0B4J1K1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms