Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.33■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.33■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.33■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sirpb1aA0A0A6YYP6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sirpb1aA0A0A6YYP6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.33■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sirpb1aA0A0A6YYP6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sirpb1aA0A0A6YYP6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Gm6365-201ENSMUST00000054711 744 ntBASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.31■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1aA0A0A6YYP6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.31■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.31■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.31■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.31■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Mir2861-201ENSMUST00000175539 82 ntBASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms