Protein–RNA interactions for Protein: A0A0A6YYE8

Tcrg-V7, T cell receptor gamma, variable 7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V7A0A0A6YYE8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Gm7889-201ENSMUST00000185591 958 ntBASIC16■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Gm9987-201ENSMUST00000069768 567 ntBASIC16■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.96■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Gm2274-201ENSMUST00000184539 609 ntBASIC15.96■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tcrg-V7A0A0A6YYE8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
Tcrg-V7A0A0A6YYE8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tcrg-V7A0A0A6YYE8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms