Protein–RNA interactions for Protein: A0A0A6YYE5

Igkv4-78, Immunoglobulin kappa variable 4-78 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-78A0A0A6YYE5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igkv4-78A0A0A6YYE5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv4-78A0A0A6YYE5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.21□□□□□ -0.45
Igkv4-78A0A0A6YYE5 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv4-78A0A0A6YYE5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Gm7291-201ENSMUST00000199147 382 ntBASIC12.21□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.21□□□□□ -0.45
Igkv4-78A0A0A6YYE5 AV356131-201ENSMUST00000206201 750 ntBASIC12.21□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igkv4-78A0A0A6YYE5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv4-78A0A0A6YYE5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Gm2399-201ENSMUST00000104944 225 ntBASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Mir8112-201ENSMUST00000184382 131 ntBASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.2□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.19□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.18□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.18□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv4-78A0A0A6YYE5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv4-78A0A0A6YYE5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms