Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv3A0A0A6YYE2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv3A0A0A6YYE2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trbv3A0A0A6YYE2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.27□□□□□ -0.28
Trbv3A0A0A6YYE2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.27□□□□□ -0.28
Trbv3A0A0A6YYE2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trbv3A0A0A6YYE2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv3A0A0A6YYE2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trbv3A0A0A6YYE2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv3A0A0A6YYE2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv3A0A0A6YYE2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv3A0A0A6YYE2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv3A0A0A6YYE2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv3A0A0A6YYE2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv3A0A0A6YYE2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.27□□□□□ -0.29
Trbv3A0A0A6YYE2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
Trbv3A0A0A6YYE2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv3A0A0A6YYE2 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.27□□□□□ -0.29
Trbv3A0A0A6YYE2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.27□□□□□ -0.29
Trbv3A0A0A6YYE2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv3A0A0A6YYE2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms