Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-42A0A0A6YY38 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-42A0A0A6YY38 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ighv1-42A0A0A6YY38 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-42A0A0A6YY38 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-42A0A0A6YY38 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ighv1-42A0A0A6YY38 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.89■□□□□ 0.13
Ighv1-42A0A0A6YY38 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-42A0A0A6YY38 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ighv1-42A0A0A6YY38 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Ighv1-42A0A0A6YY38 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-42A0A0A6YY38 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ighv1-42A0A0A6YY38 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-42A0A0A6YY38 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-42A0A0A6YY38 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-42A0A0A6YY38 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-42A0A0A6YY38 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Ighv1-42A0A0A6YY38 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-42A0A0A6YY38 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-42A0A0A6YY38 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-42A0A0A6YY38 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-42A0A0A6YY38 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-42A0A0A6YY38 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Ighv1-42A0A0A6YY38 Gm9103-201ENSMUST00000119371 405 ntBASIC15.88■□□□□ 0.13
Ighv1-42A0A0A6YY38 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-42A0A0A6YY38 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-42A0A0A6YY38 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-42A0A0A6YY38 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-42A0A0A6YY38 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-42A0A0A6YY38 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Ighv1-42A0A0A6YY38 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-42A0A0A6YY38 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ighv1-42A0A0A6YY38 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ighv1-42A0A0A6YY38 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
Ighv1-42A0A0A6YY38 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-42A0A0A6YY38 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ighv1-42A0A0A6YY38 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Gm11950-201ENSMUST00000121615 838 ntBASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.87■□□□□ 0.13
Ighv1-42A0A0A6YY38 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-42A0A0A6YY38 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-42A0A0A6YY38 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.86■□□□□ 0.13
Ighv1-42A0A0A6YY38 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-42A0A0A6YY38 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.86■□□□□ 0.13
Ighv1-42A0A0A6YY38 Gm37722-201ENSMUST00000193757 208 ntBASIC15.86■□□□□ 0.13
Ighv1-42A0A0A6YY38 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-42A0A0A6YY38 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-42A0A0A6YY38 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-42A0A0A6YY38 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-42A0A0A6YY38 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-42A0A0A6YY38 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-42A0A0A6YY38 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-42A0A0A6YY38 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-42A0A0A6YY38 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-42A0A0A6YY38 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-42A0A0A6YY38 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-42A0A0A6YY38 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-42A0A0A6YY38 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-42A0A0A6YY38 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms