Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Gm7290-201ENSMUST00000104990 617 ntBASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Gm12918-201ENSMUST00000120234 636 ntBASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Gm15710-201ENSMUST00000121821 636 ntBASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Gm5075-201ENSMUST00000196916 622 ntBASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Idnk-204ENSMUST00000226010 1898 ntBASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv23A0A0A6YWQ1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv23A0A0A6YWQ1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv23A0A0A6YWQ1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trbv23A0A0A6YWQ1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.79□□□□□ -0.04
Trbv23A0A0A6YWQ1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trbv23A0A0A6YWQ1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trbv23A0A0A6YWQ1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.79□□□□□ -0.04
Trbv23A0A0A6YWQ1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trbv23A0A0A6YWQ1 Mir5133-201ENSMUST00000174955 77 ntBASIC14.79□□□□□ -0.04
Trbv23A0A0A6YWQ1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv23A0A0A6YWQ1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trbv23A0A0A6YWQ1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.79□□□□□ -0.04
Trbv23A0A0A6YWQ1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv23A0A0A6YWQ1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv23A0A0A6YWQ1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv23A0A0A6YWQ1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv23A0A0A6YWQ1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Trbv23A0A0A6YWQ1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv23A0A0A6YWQ1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv23A0A0A6YWQ1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv23A0A0A6YWQ1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv23A0A0A6YWQ1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms