Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gm45774-201ENSMUST00000211992 2665 ntBASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gm18671-201ENSMUST00000214826 683 ntBASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gm13509-201ENSMUST00000119733 1308 ntBASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gm15743-202ENSMUST00000182690 1901 ntBASIC11.86□□□□□ -0.51
Trav13-4-dv7A0A075B6C2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms